RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA1156092" and tax_phylum = "Evosea"

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tax_superkingdom 1

tax_phylum 1

  • Evosea · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1156092 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9965424 9965424 PRJNA1156092_P_NODE_28688_length_245_cov_0.895349_g28558_i0 PRJNA1156092 28688 245 0.895349 2.19360505 Entamoeba 5758 Evosea other_Eukaryota 182 2.7e-41   NTclustered gi|158940|gb|L02417.1|ENHEF2 5759 g28558 i0 80.247 33.5469387755102 243 46 99 2 4 245 442 201 Entamoeba histolytica translation elongation factor-2 (EF-2) mRNA, complete cds blastn 8219 182 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Entamoeba Entamoeba histolytica
11240477 11240477 PRJNA1156092_P_NODE_17889_length_278_cov_1.287805_g17759_i0 PRJNA1156092 17889 278 1.287805 3.5800979 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 52.8 0.026   NTclustered gi|470239202|ref|XM_004351315.1| 261658 g17759 i0 100 0.201438848920863 28 0 10 0 141 168 120 147 Cavenderia fasciculata subunit of anaphase promoting complex (cdc26), partial mRNA blastn 56 52.8 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;