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contig_metadata

5 rows where analysis = "blastn", bioproject = "PRJNA1150539" and tax_superkingdom = "Archaea"

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tax_kingdom 2

tax_superkingdom 1

  • Archaea · 5 ✖

bioproject 1

  • PRJNA1150539 · 5 ✖

analysis 1

  • blastn · 5 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7954010 7954010 PRJNA1150539_S_NODE_106587_length_233_cov_2.506250_g105991_i0 PRJNA1150539 106587 233 2.50625 5.8395625 Methanococcus maripaludis 39152 Archaea Archaea 54.7 0.006   NTclustered gi|1342459100|gb|CP026606.1| 39152 g105991 i0 94.286 0.150214592274678 35 2 15 0 107 141 1423590 1423556 Methanococcus maripaludis strain DSM 2067 chromosome, complete genome blastn 35 54.7 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanococci Methanococcales Methanococcaceae Methanococcus Methanococcus maripaludis
7954924 7954924 PRJNA1150539_S_NODE_96227_length_247_cov_1.517241_g95631_i0 PRJNA1150539 96227 247 1.517241 3.74758527 Candidatus Nitrososphaera gargensis 497727 Archaea Archaea 52.8 0.022   NTclustered gi|408363220|gb|CP002408.1| 1237085 g95631 i0 100 0.11336032388664 28 0 11 0 136 163 887864 887837 Candidatus Nitrososphaera gargensis Ga9.2, complete genome blastn 28 52.8 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Nitrososphaera Candidatus Nitrososphaera gargensis
11779531 11779531 PRJNA1150539_S_NODE_107950_length_230_cov_2.343949_g107354_i0 PRJNA1150539 107950 230 2.343949 5.3910827 Halorussus gelatinilyticus 2937524 Archaea Archaea 52.8 0.021   NTclustered gi|2234308622|gb|CP096658.1| 2937524 g107354 i0 100 0.121739130434783 28 0 12 0 24 51 3593268 3593295 Halorussus gelatinilyticus strain XZYJT40 chromosome, complete genome blastn 28 52.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haladaptataceae Halorussus Halorussus gelatinilyticus
18153612 18153612 PRJNA1150539_S_NODE_99655_length_244_cov_0.900585_g99059_i0 PRJNA1150539 99655 244 0.900585 2.1974274 Sulfolobus sp. S-194 2512240 Archaea Archaea 54.7 0.006   NTclustered gi|1829572363|gb|CP035730.1| 2512240 g99059 i0 90.698 0.520491803278688 43 1 16 3 121 160 641030 640988 Sulfolobus sp. S-194 chromosome, complete genome blastn 127 54.7 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Sulfolobales Sulfolobaceae Sulfolobus Sulfolobus sp. S-194
19427805 19427805 PRJNA1150539_S_NODE_82356_length_263_cov_1.394737_g81760_i0 PRJNA1150539 82356 263 1.394737 3.66815831 uncultured archaeon 115547 Archaea Archaea 56.5 0.002   NTclustered gi|1148943109|gb|KY476761.1| 115547 g81760 i0 100 0.114068441064639 30 0 11 0 198 227 1839 1868 Uncultured archaeon clone rifoxyb1_full_scaffold_3219_curated genomic sequence blastn 30 56.5 1 Archaea               uncultured archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;