RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA1150539" and tax_phylum = "Mucoromycota"

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tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1150539 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6679445 6679445 PRJNA1150539_S_NODE_71246_length_278_cov_1.331707_g70650_i0 PRJNA1150539 71246 278 1.331707 3.70214546 Umbelopsis ramanniana 41833 Fungi Fungi 52.8 0.026   NTclustered gi|2323696020|ref|XM_051591650.1| 1314678 g70650 i0 100 0.100719424460432 28 0 10 0 30 57 392 419 Umbelopsis ramanniana AG uncharacterized protein (K450DRAFT_257341), mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Fungi Mucoromycota Umbelopsidomycetes Umbelopsidales Umbelopsidaceae Umbelopsis Umbelopsis ramanniana
15064526 15064526 PRJNA1150539_S_NODE_72032_length_276_cov_27.088670_g71436_i0 PRJNA1150539 72032 276 27.08867 74.7647292 Fungi 4751 Fungi Fungi 468 2.13e-127   NTclustered gi|658131632|emb|HF968958.1| 4874 g71436 i0 100 125.463768115942 253 0 92 0 1 253 2256 2004 Gigaspora margarita partial 28S rRNA gene, strain BEG34, isolate spore 4, clone BL2_6_26 blastn 34628 468 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Diversisporales Gigasporaceae Gigaspora Gigaspora margarita
23254145 23254145 PRJNA1150539_S_NODE_99239_length_244_cov_1.801170_g98643_i0 PRJNA1150539 99239 244 1.80117 4.3948548 Rhizopus delemar 936053 Fungi Fungi 344 3.2399999999999993e-90   NTclustered gi|2797477022|ref|XM_067667667.1| 246409 g98643 i0 92.5 11.8729508196721 240 18 98 0 1 240 345 106 Rhizopus delemar RA 99-880 ribosomal protein L28e (RO3G_13083), partial mRNA blastn 2897 344 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Rhizopodaceae Rhizopus Rhizopus delemar

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;