RNAquarium Metadata Server
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contig_metadata

5 rows where analysis = "blastn", bioproject = "PRJNA1150539" and tax_phylum = "Microsporidia"

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tax_superkingdom 1

tax_phylum 1

  • Microsporidia · 5 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1150539 · 5 ✖

analysis 1

  • blastn · 5 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2851952 2851952 PRJNA1150539_S_NODE_1783_length_1072_cov_18.910911_g1361_i0 PRJNA1150539 1783 1072 18.910911 202.72496592 Pseudoloma neurophilia 146866 Fungi Fungi 1932 0   NTclustered gi|11993647|gb|AF322654.1| 146866 g1361 i0 99.621 94.4123134328358 1056 4 99 0 17 1072 21 1076 Pseudoloma neurophilia small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 101210 1932 1 Eukaryota Opisthokonta Fungi Microsporidia       Pseudoloma Pseudoloma neurophilia
4864870 4864870 PRJNA1150539_S_NODE_60584_length_293_cov_5.386364_g59988_i0 PRJNA1150539 60584 293 5.386364 15.78204652 Pleistophoridae 35232 Fungi Fungi 442 1.3799999999999993e-119   NTclustered gi|134147422|gb|EF119339.1| 249366 g59988 i0 94.425 23.8464163822526 287 14 97 1 9 293 3541 3255 Pleistophora mulleri 16S ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence blastn 6987 446 0.991031390134529 Eukaryota Opisthokonta Fungi Microsporidia     Pleistophoridae Pleistophora Pleistophora mulleri
7954527 7954527 PRJNA1150539_S_NODE_5547_length_528_cov_5.503297_g4958_i0 PRJNA1150539 5547 528 5.503297 29.05740816 Pseudoloma neurophilia 146866 Fungi Fungi 590 8.879999999999997e-164   NTclustered gi|11993647|gb|AF322654.1| 146866 g4958 i0 99.385 63.1893939393939 325 1 61 1 205 528 1980 1656 Pseudoloma neurophilia small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 33364 590 1 Eukaryota Opisthokonta Fungi Microsporidia       Pseudoloma Pseudoloma neurophilia
18152827 18152827 PRJNA1150539_S_NODE_26175_length_363_cov_1.858621_g25579_i0 PRJNA1150539 26175 363 1.858621 6.74679423 Vavraia culicis 103449 Fungi Fungi 462 1.34e-125   NTclustered gi|667636757|ref|XR_552273.1| 948595 g25579 i0 89.617 18.2424242424242 366 34 100 3 1 363 650 1014 Vavraia culicis subsp. floridensis 28S ribosomal RNA (VCUG_02832), partial rRNA blastn 6622 462 1 Eukaryota Opisthokonta Fungi Microsporidia     Pleistophoridae Vavraia Vavraia culicis
21978073 21978073 PRJNA1150539_S_NODE_3978_length_610_cov_6.530726_g3406_i0 PRJNA1150539 3978 610 6.530726 39.8374286 Pleistophora mulleri 249366 Fungi Fungi 525 2.959999999999999e-144   NTclustered gi|134147422|gb|EF119339.1| 249366 g3406 i0 82.871 25.9819672131148 613 76 97 25 1 593 3095 2492 Pleistophora mulleri 16S ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence blastn 15849 525 1 Eukaryota Opisthokonta Fungi Microsporidia     Pleistophoridae Pleistophora Pleistophora mulleri

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;