contig_metadata
10 rows where analysis = "blastn", bioproject = "PRJNA1150539" and tax_kingdom = "Fusobacteriati"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 301164 | 301164 | PRJNA1150539_S_NODE_38081_length_334_cov_1.398467_g37485_i0 | PRJNA1150539 | 38081 | 334 | 1.398467 | 4.67087978 | Leptotrichia hofstadii | 157688 | Bacteria | Bacteria | 577 | 4.199999999999999e-160 | NTclustered | gi|1708566027|dbj|AP019823.1| | 157688 | g37485 | i0 | 97.91 | 291.556886227545 | 335 | 4 | 100 | 3 | 1 | 334 | 499485 | 499153 | Leptotrichia hofstadii JCM16775 DNA, complete genome | blastn | 97380 | 577 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia hofstadii | ||
| 301260 | 301260 | PRJNA1150539_S_NODE_46861_length_316_cov_5.641975_g46265_i0 | PRJNA1150539 | 46861 | 316 | 5.641975 | 17.828641 | uncultured Ilyobacter sp. | 544433 | Bacteria | Bacteria | 52.8 | 0.03 | NTclustered | gi|2621717559|emb|OY775911.1| | 544433 | g46265 | i0 | 100 | 0.265822784810127 | 28 | 0 | 9 | 0 | 33 | 60 | 1256796 | 1256823 | MAG: uncultured Ilyobacter sp. isolate 988a6a11-b556-497a-8909-2adea115d691 genome assembly, chromosome: 1 | blastn | 84 | 52.8 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Ilyobacter | uncultured Ilyobacter sp. | ||
| 11239877 | 11239877 | PRJNA1150539_S_NODE_104309_length_238_cov_2.503030_g103713_i0 | PRJNA1150539 | 104309 | 238 | 2.50303 | 5.9572114 | Fusobacterium | 848 | Bacteria | Bacteria | 374 | 4.02e-99 | NTclustered | gi|1208657894|gb|CP021934.1| | 76857 | g103713 | i0 | 94.958 | 18.936974789916 | 238 | 12 | 100 | 0 | 1 | 238 | 213516 | 213753 | Fusobacterium nucleatum subsp. polymorphum strain KCOM 1260 (=ChDC F218) genome | blastn | 4507 | 374 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium polymorphum | ||
| 11240008 | 11240008 | PRJNA1150539_S_NODE_39329_length_331_cov_2.825581_g38733_i0 | PRJNA1150539 | 39329 | 331 | 2.825581 | 9.35267311 | Leptotrichia | 32067 | Bacteria | Bacteria | 52.8 | 0.031 | NTclustered | gi|1708566027|dbj|AP019823.1| | 157688 | g38733 | i0 | 100 | 0.253776435045317 | 28 | 0 | 8 | 0 | 273 | 300 | 174403 | 174376 | Leptotrichia hofstadii JCM16775 DNA, complete genome | blastn | 84 | 52.8 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia hofstadii | ||
| 13054932 | 13054932 | PRJNA1150539_S_NODE_39631_length_330_cov_5.357977_g39035_i0 | PRJNA1150539 | 39631 | 330 | 5.357977 | 17.6813241 | Leptotrichia wadei | 157687 | Bacteria | Bacteria | 603 | 6.839999999999998e-168 | NTclustered | gi|1708582457|dbj|AP019841.1| | 157687 | g39035 | i0 | 99.696 | 207.521212121212 | 329 | 1 | 99 | 0 | 2 | 330 | 2299144 | 2298816 | Leptotrichia wadei JMUB3936 DNA, complete genome | blastn | 68482 | 603 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia wadei | ||
| 18153484 | 18153484 | PRJNA1150539_S_NODE_86695_length_257_cov_3.451087_g86099_i0 | PRJNA1150539 | 86695 | 257 | 3.451087 | 8.86929359 | Fusobacterium pseudoperiodonticum | 2663009 | Bacteria | Bacteria | 475 | 1.1699999999999999e-129 | NTclustered | gi|1276707709|gb|CP024699.1| | 2663009 | g86099 | i0 | 100 | 88.9066147859922 | 257 | 0 | 100 | 0 | 1 | 257 | 1778609 | 1778353 | Fusobacterium pseudoperiodonticum strain KCOM 1261 chromosome, complete genome | blastn | 22849 | 475 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium pseudoperiodonticum | ||
| 18888209 | 18888209 | PRJNA1150539_S_NODE_2075_length_928_cov_4.247953_g1606_i0 | PRJNA1150539 | 2075 | 928 | 4.247953 | 39.42100384 | Fusobacterium | 848 | Bacteria | Bacteria | 1670 | 0 | NTclustered | gi|2444100754|gb|CP117525.1| | 851 | g1606 | i0 | 99.138 | 490.009698275862 | 928 | 8 | 100 | 0 | 1 | 928 | 177512 | 176585 | Fusobacterium nucleatum strain FNV chromosome, complete genome | blastn | 454729 | 1670 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium nucleatum | ||
| 20702985 | 20702985 | PRJNA1150539_S_NODE_68577_length_281_cov_5.081731_g67981_i0 | PRJNA1150539 | 68577 | 281 | 5.0817310000000004 | 14.27966411 | Fusobacterium pseudoperiodonticum | 2663009 | Bacteria | Bacteria | 486 | 5.989999999999999e-133 | NTclustered | gi|1276716588|gb|CP024703.1| | 2663009 | g67981 | i0 | 97.865 | 11.9430604982206 | 281 | 6 | 100 | 0 | 1 | 281 | 248453 | 248173 | Fusobacterium pseudoperiodonticum strain KCOM 2305 chromosome, complete genome | blastn | 3356 | 486 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium pseudoperiodonticum | ||
| 23988806 | 23988806 | PRJNA1150539_S_NODE_108179_length_229_cov_3.487179_g107583_i0 | PRJNA1150539 | 108179 | 229 | 3.487179 | 7.98563991 | Leptotrichia | 32067 | Bacteria | Bacteria | 412 | 8.13e-111 | NTclustered | gi|1708566027|dbj|AP019823.1| | 157688 | g107583 | i0 | 99.127 | 86.6812227074236 | 229 | 2 | 100 | 0 | 1 | 229 | 2256929 | 2257157 | Leptotrichia hofstadii JCM16775 DNA, complete genome | blastn | 19850 | 412 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia hofstadii | ||
| 24527512 | 24527512 | PRJNA1150539_S_NODE_67720_length_283_cov_1.247619_g67124_i0 | PRJNA1150539 | 67720 | 283 | 1.247619 | 3.53076177 | Fusobacterium periodonticum | 860 | Bacteria | Bacteria | 483 | 7.809999999999997e-132 | NTclustered | gi|1370537877|gb|CP028108.1| | 860 | g67124 | i0 | 97.518 | 99.6890459363958 | 282 | 7 | 99 | 0 | 2 | 283 | 648828 | 649109 | Fusobacterium periodonticum strain 2_1_31 chromosome, complete genome | blastn | 28212 | 483 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium periodonticum |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;