RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA1150539" and tax_kingdom = "Bamfordvirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Bamfordvirae · 2 ✖

bioproject 1

  • PRJNA1150539 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
16878498 16878498 PRJNA1150539_S_NODE_56974_length_299_cov_2.725664_g56378_i0 PRJNA1150539 56974 299 2.725664 8.14973536 Tupanvirus altamarinense 3060757 Viruses Viruses 52.8 0.028   NTclustered gi|2500356781|ref|NC_075038.1| 2126984 g56378 i0 100 0.0936454849498328 28 0 9 0 65 92 976750 976723 Tupanvirus deep ocean, complete genome blastn 28 52.8 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Tupanvirus Tupanvirus altamarinense
19427630 19427630 PRJNA1150539_S_NODE_64296_length_288_cov_1.432558_g63700_i0 PRJNA1150539 64296 288 1.432558 4.12576704 Erythrocytic necrosis virus 1543320 Viruses Viruses 200 8.99e-47   NTclustered gi|1624806707|gb|MK638720.1| 1543320 g63700 i0 88.757 40.1944444444444 169 11 56 4 127 287 36 204 Erythrocytic necrosis virus isolate SEQ_18 putative RNA-dependent DNA polymerase mRNA, partial cds blastn 11576 200 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Pimascovirales Iridoviridae   Erythrocytic necrosis virus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;