RNAquarium Metadata Server
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contig_metadata

7 rows where analysis = "blastn", bioproject = "PRJNA1148190" and tax_phylum = "Parabasalia"

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tax_superkingdom 1

tax_phylum 1

  • Parabasalia · 7 ✖

tax_clade 1

bioproject 1

  • PRJNA1148190 · 7 ✖

analysis 1

  • blastn · 7 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2849875 2849875 PRJNA1148190_P_NODE_687683_length_246_cov_0.890173_g676510_i0 PRJNA1148190 687683 246 0.890173 2.18982558 Trichomonas vaginalis 5722 Parabasalia other_Eukaryota 58.4 4.78e-4   NTclustered gi|123458278|ref|XM_001316525.1| 412133 g676510 i0 97.059 0.138211382113821 34 1 14 0 185 218 4797 4830 Trichomonas vaginalis G3 uncharacterized protein (TVAGG3_0220710), partial mRNA blastn 34 58.4 1 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas vaginalis
5399105 5399105 PRJNA1148190_P_NODE_45825_length_909_cov_1.416268_g35168_i0 PRJNA1148190 45825 909 1.416268 12.87387612 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 56.5 0.007   NTclustered gi|2806481794|ref|XM_068511670.1| 1144522 g35168 i0 97.059 0.0374037403740374 34 0 4 1 442 475 7799 7831 Tritrichomonas foetus uncharacterized protein (TRFO_37840), partial mRNA blastn 34 56.5 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
6670256 6670256 PRJNA1148190_P_NODE_217026_length_364_cov_0.869416_g205856_i0 PRJNA1148190 217026 364 0.869416 3.16467424 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 52.8 0.035   NTclustered gi|2806457310|ref|XM_068503063.1| 1144522 g205856 i0 100 0.0769230769230769 28 0 8 0 53 80 2533 2506 Tritrichomonas foetus uncharacterized protein (TRFO_23290), partial mRNA blastn 28 52.8 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
10498544 10498544 PRJNA1148190_P_NODE_382129_length_290_cov_1.133641_g370956_i0 PRJNA1148190 382129 290 1.133641 3.2875589 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 56.5 0.002   NTclustered gi|2806451296|ref|XM_068489875.1| 1144522 g370956 i0 89.13 0.158620689655172 46 4 16 1 140 185 1320 1276 Tritrichomonas foetus uncharacterized protein (TRFO_01045), partial mRNA blastn 46 56.5 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
15602635 15602635 PRJNA1148190_P_NODE_757213_length_242_cov_1.118343_g746040_i0 PRJNA1148190 757213 242 1.118343 2.70639006 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 54.7 0.006   NTclustered gi|2806461390|ref|XM_068504595.1| 1144522 g746040 i0 96.875 0.132231404958678 32 1 13 0 139 170 3162 3131 Tritrichomonas foetus uncharacterized protein (TRFO_25833), partial mRNA blastn 32 54.7 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
16876920 16876920 PRJNA1148190_P_NODE_762594_length_242_cov_0.911243_g751421_i0 PRJNA1148190 762594 242 0.911243 2.20520806 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 52.8 0.022   NTclustered gi|2806472845|ref|XM_068508721.1| 1144522 g751421 i0 96.875 0.132231404958678 32 0 13 1 24 55 1934 1904 Tritrichomonas foetus uncharacterized protein (TRFO_32844), partial mRNA blastn 32 52.8 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
23245501 23245501 PRJNA1148190_P_NODE_269159_length_334_cov_0.896552_g257988_i0 PRJNA1148190 269159 334 0.896552 2.99448368 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 65.8 4.04e-6   NTclustered gi|2806479491|ref|XM_068510990.1| 1144522 g257988 i0 91.489 0.224550898203593 47 4 14 0 70 116 448 402 Tritrichomonas foetus CAMK family protein kinase (TRFO_36707), partial mRNA blastn 75 65.8 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;