RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA1148190" and tax_phylum = "Nematomorpha"

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tax_superkingdom 1

tax_phylum 1

  • Nematomorpha · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1148190 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10502083 10502083 PRJNA1148190_P_NODE_631289_length_249_cov_0.875000_g620116_i0 PRJNA1148190 631289 249 0.875 2.17875 Gordionus sp. m RMFG-2023 3053472 Nematomorpha other_Eukaryota 54.7 0.006   NTclustered gi|2733955186|ref|XR_010571812.1| 3053472 g620116 i0 100 0.116465863453815 29 0 12 0 76 104 596 568 PREDICTED: Gordionus sp. m RMFG-2023 uncharacterized LOC135926254 (LOC135926254), transcript variant X1, ncRNA blastn 29 54.7 1 Eukaryota Opisthokonta Metazoa Nematomorpha Gordioida Chordodea Parachordodidae Gordionus Gordionus sp. m RMFG-2023
14324492 14324492 PRJNA1148190_P_NODE_430752_length_280_cov_1.449275_g419579_i0 PRJNA1148190 430752 280 1.449275 4.05797 Gordionus sp. m RMFG-2023 3053472 Nematomorpha other_Eukaryota 95.3 4.23e-15   NTclustered gi|2733962267|ref|XM_065465536.1| 3053472 g419579 i0 88.462 0.707142857142857 78 9 28 0 191 268 472 395 PREDICTED: Gordionus sp. m RMFG-2023 transitional endoplasmic reticulum ATPase (LOC135929045), mRNA blastn 198 95.3 1 Eukaryota Opisthokonta Metazoa Nematomorpha Gordioida Chordodea Parachordodidae Gordionus Gordionus sp. m RMFG-2023
20693997 20693997 PRJNA1148190_P_NODE_227957_length_356_cov_1.632509_g216787_i0 PRJNA1148190 227957 356 1.632509 5.81173204 Gordionus sp. m RMFG-2023 3053472 Nematomorpha other_Eukaryota 52.8 0.034   NTclustered gi|2733957004|ref|XM_065462973.1| 3053472 g216787 i0 100 0.0786516853932584 28 0 8 0 263 290 606 579 PREDICTED: Gordionus sp. m RMFG-2023 KH homology domain-containing protein 4-like (LOC135927037), mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Nematomorpha Gordioida Chordodea Parachordodidae Gordionus Gordionus sp. m RMFG-2023
20701995 20701995 PRJNA1148190_P_NODE_86557_length_582_cov_2.186640_g75424_i0 PRJNA1148190 86557 582 2.18664 12.7262448 Gordionus sp. m RMFG-2023 3053472 Nematomorpha other_Eukaryota 185 5.429999999999998e-42   NTclustered gi|2733957639|ref|XM_065463270.1| 3053472 g75424 i0 82.464 2.30756013745704 211 37 36 0 90 300 231 441 PREDICTED: Gordionus sp. m RMFG-2023 histone H2A.V (LOC135927303), mRNA blastn 1343 185 1 Eukaryota Opisthokonta Metazoa Nematomorpha Gordioida Chordodea Parachordodidae Gordionus Gordionus sp. m RMFG-2023

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;