RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA1148190" and tax_phylum = "Microsporidia"

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tax_superkingdom 1

tax_phylum 1

  • Microsporidia · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1148190 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
298302 298302 PRJNA1148190_P_NODE_633381_length_249_cov_0.875000_g622208_i0 PRJNA1148190 633381 249 0.875 2.17875 Vittaforma corneae 42399 Fungi Fungi 374 4.23e-99   NTclustered gi|667639983|ref|XR_552275.1| 993615 g622208 i0 96.46 17.9598393574297 226 8 91 0 24 249 781 556 Vittaforma corneae ATCC 50505 28S ribosomal RNA (VICG_02297), rRNA blastn 4472 374 1 Eukaryota Opisthokonta Fungi Microsporidia     Nosematidae Vittaforma Vittaforma corneae
9227579 9227579 PRJNA1148190_P_NODE_736628_length_243_cov_1.358824_g725455_i0 PRJNA1148190 736628 243 1.358824 3.30194232 Vairimorpha ceranae 40302 Fungi Fungi 121 5.92e-23   NTclustered gi|1372262162|ref|XM_024473662.1| 40302 g725455 i0 86.916 1.80246913580247 107 14 44 0 3 109 1420 1526 Nosema ceranae dna-directed rna polymerase ii subunit rpb2 (AAJ76_100078281), partial mRNA blastn 438 121 1 Eukaryota Opisthokonta Fungi Microsporidia     Nosematidae Vairimorpha Vairimorpha ceranae
11773308 11773308 PRJNA1148190_P_NODE_365970_length_295_cov_1.040541_g354797_i0 PRJNA1148190 365970 295 1.040541 3.06959595 Mitosporidium daphniae 1485682 Fungi Fungi 353 6.7e-93   NTclustered gi|914962574|ref|XM_013382530.1| 1485682 g354797 i0 89.085 0.96271186440678 284 31 96 0 10 293 455 172 Mitosporidium daphniae transposase (DI09_323p10), partial mRNA blastn 284 353 1 Eukaryota Opisthokonta Fungi Microsporidia       Mitosporidium Mitosporidium daphniae
16875766 16875766 PRJNA1148190_P_NODE_669634_length_247_cov_0.885057_g658461_i0 PRJNA1148190 669634 247 0.885057 2.18609079 Vairimorpha ceranae 40302 Fungi Fungi 54.7 0.006   NTclustered gi|1372264062|ref|XM_024473946.1| 40302 g658461 i0 100 0.117408906882591 29 0 12 0 219 247 759 731 Nosema ceranae hypothetical protein (AAJ76_1300037766), partial mRNA blastn 29 54.7 1 Eukaryota Opisthokonta Fungi Microsporidia     Nosematidae Vairimorpha Vairimorpha ceranae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;