RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA1148190" and tax_phylum = "Kiritimatiellota"

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tax_superkingdom 1

tax_phylum 1

  • Kiritimatiellota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1148190 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
14323473 14323473 PRJNA1148190_P_NODE_360352_length_297_cov_1.031250_g349179_i0 PRJNA1148190 360352 297 1.03125 3.0628125 Tichowtungia aerotolerans 2697043 Bacteria Bacteria 182 3.37e-41   NTclustered gi|1798450978|gb|CP047593.1| 2697043 g349179 i0 78.292 17.8013468013468 281 61 95 0 15 295 320959 320679 Tichowtungia aerotolerans strain S-5007 chromosome, complete genome blastn 5287 182 1 Bacteria PVC group Pseudomonadati Kiritimatiellota Tichowtungiia Tichowtungiales Tichowtungiaceae Tichowtungia Tichowtungia aerotolerans
20697673 20697673 PRJNA1148190_P_NODE_475177_length_271_cov_1.848485_g464004_i0 PRJNA1148190 475177 271 1.848485 5.00939435 Tichowtungia aerotolerans 2697043 Bacteria Bacteria 63.9 1.15e-5   NTclustered gi|1798450978|gb|CP047593.1| 2697043 g464004 i0 95.122 0.151291512915129 41 1 15 1 231 271 2154350 2154389 Tichowtungia aerotolerans strain S-5007 chromosome, complete genome blastn 41 63.9 1 Bacteria PVC group Pseudomonadati Kiritimatiellota Tichowtungiia Tichowtungiales Tichowtungiaceae Tichowtungia Tichowtungia aerotolerans

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;