RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA1148190" and tax_phylum = "Cressdnaviricota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Cressdnaviricota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1148190 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4123956 4123956 PRJNA1148190_P_NODE_536044_length_259_cov_5.758065_g524871_i0 PRJNA1148190 536044 259 5.758065 14.91338835 Herugrimvirus gladden 2955985 Viruses Viruses 457 4.279999999999999e-124   NTclustered gi|1896080254|gb|MT293424.1| 2766565 g524871 i0 98.456 1 259 4 100 0 1 259 241 499 Giardia-associated CRESS DNA virus 1 isolate 84-AMS-04, partial genome blastn 259 457 1 Viruses   Shotokuvirae Cressdnaviricota Arfiviricetes Cirlivirales Vilyaviridae Herugrimvirus Herugrimvirus gladden
9220231 9220231 PRJNA1148190_P_NODE_204368_length_373_cov_1.376667_g193198_i0 PRJNA1148190 204368 373 1.376667 5.13496791 Herugrimvirus gladden 2955985 Viruses Viruses 641 1.66e-179   NTclustered gi|1896080254|gb|MT293424.1| 2766565 g193198 i0 97.844 0.994638069705094 371 8 99 0 1 371 679 1049 Giardia-associated CRESS DNA virus 1 isolate 84-AMS-04, partial genome blastn 371 641 1 Viruses   Shotokuvirae Cressdnaviricota Arfiviricetes Cirlivirales Vilyaviridae Herugrimvirus Herugrimvirus gladden
10500862 10500862 PRJNA1148190_P_NODE_541709_length_258_cov_2.221622_g530536_i0 PRJNA1148190 541709 258 2.221622 5.73178476 Vingilotevirus gamgee 2956647 Viruses Viruses 274 4.6e-69   NTclustered gi|2500381887|ref|NC_076892.1| 2766566 g530536 i0 85.878 1.01550387596899 262 32 100 3 1 258 1784 1524 Giardia-associated CRESS DNA virus 2 isolate 84-AMS-01, complete genome blastn 262 274 1 Viruses   Shotokuvirae Cressdnaviricota Arfiviricetes Cirlivirales Vilyaviridae Vingilotevirus Vingilotevirus gamgee

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;