contig_metadata
12 rows where analysis = "blastn", bioproject = "PRJNA1148190" and tax_phylum = "Chlorobiota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1570200 | 1570200 | PRJNA1148190_P_NODE_433902_length_279_cov_2.242718_g422729_i0 | PRJNA1148190 | 433902 | 279 | 2.242718 | 6.25718322 | Chlorobiota bacterium | 2268192 | Bacteria | Bacteria | 52.8 | 0.026 | NTclustered | gi|1958119998|gb|CP065014.1| | 2268192 | g422729 | i0 | 100 | 0.100358422939068 | 28 | 0 | 10 | 0 | 235 | 262 | 779690 | 779663 | MAG: Chlorobiota bacterium isolate Ribe_18-Q3-R11-54_MAXAC.096_cln chromosome, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | FCB group | Pseudomonadati | Chlorobiota | Chlorobiota bacterium | |||||
| 1574559 | 1574559 | PRJNA1148190_P_NODE_770182_length_242_cov_0.911243_g759009_i0 | PRJNA1148190 | 770182 | 242 | 0.911243 | 2.20520806 | Chlorobiota bacterium | 2268192 | Bacteria | Bacteria | 158 | 4.49e-34 | NTclustered | gi|1958119998|gb|CP065014.1| | 2268192 | g759009 | i0 | 79.237 | 70.6322314049587 | 236 | 41 | 96 | 8 | 11 | 242 | 4960 | 5191 | MAG: Chlorobiota bacterium isolate Ribe_18-Q3-R11-54_MAXAC.096_cln chromosome, complete genome | blastn | 17093 | 158 | 1 | Bacteria | FCB group | Pseudomonadati | Chlorobiota | Chlorobiota bacterium | |||||
| 2309740 | 2309740 | PRJNA1148190_P_NODE_248862_length_344_cov_1.136531_g237692_i0 | PRJNA1148190 | 248862 | 344 | 1.136531 | 3.90966664 | Prosthecochloris | 1101 | Bacteria | Bacteria | 78.7 | 5.37e-10 | NTclustered | gi|194310671|gb|CP001108.1| | 290512 | g237692 | i0 | 91.379 | 1.40116279069767 | 58 | 3 | 16 | 1 | 289 | 344 | 1560676 | 1560733 | Prosthecochloris aestuarii DSM 271 chromosome, complete genome | blastn | 482 | 78.7 | 1 | Bacteria | FCB group | Pseudomonadati | Chlorobiota | Chlorobiia | Chlorobiales | Chlorobiaceae | Prosthecochloris | Prosthecochloris aestuarii | |
| 2846647 | 2846647 | PRJNA1148190_P_NODE_441643_length_278_cov_1.312195_g430470_i0 | PRJNA1148190 | 441643 | 278 | 1.312195 | 3.6479021 | Chlorobium phaeobacteroides | 1096 | Bacteria | Bacteria | 204 | 6.68e-48 | NTclustered | gi|119353206|gb|CP000492.1| | 290317 | g430470 | i0 | 82.008 | 0.859712230215827 | 239 | 43 | 86 | 0 | 10 | 248 | 326398 | 326160 | Chlorobium phaeobacteroides DSM 266, complete genome | blastn | 239 | 204 | 1 | Bacteria | FCB group | Pseudomonadati | Chlorobiota | Chlorobiia | Chlorobiales | Chlorobiaceae | Chlorobium | Chlorobium phaeobacteroides | |
| 5398291 | 5398291 | PRJNA1148190_P_NODE_400365_length_286_cov_1.446009_g389192_i0 | PRJNA1148190 | 400365 | 286 | 1.446009 | 4.13558574 | Chlorobiota bacterium | 2268192 | Bacteria | Bacteria | 385 | 2.29e-102 | NTclustered | gi|1958119998|gb|CP065014.1| | 2268192 | g389192 | i0 | 90.909 | 2.20979020979021 | 286 | 26 | 100 | 0 | 1 | 286 | 2766443 | 2766728 | MAG: Chlorobiota bacterium isolate Ribe_18-Q3-R11-54_MAXAC.096_cln chromosome, complete genome | blastn | 632 | 385 | 1 | Bacteria | FCB group | Pseudomonadati | Chlorobiota | Chlorobiota bacterium | |||||
| 6673705 | 6673705 | PRJNA1148190_P_NODE_449766_length_276_cov_1.842365_g438593_i0 | PRJNA1148190 | 449766 | 276 | 1.842365 | 5.0849274 | Chlorobaculum parvum | 274539 | Bacteria | Bacteria | 148 | 3.1499999999999996e-31 | NTclustered | gi|193085153|gb|CP001099.1| | 517417 | g438593 | i0 | 83.75 | 36.3152173913044 | 160 | 22 | 57 | 4 | 2 | 159 | 222057 | 221900 | Chlorobaculum parvum NCIB 8327, complete genome | blastn | 10023 | 148 | 1 | Bacteria | FCB group | Pseudomonadati | Chlorobiota | Chlorobiia | Chlorobiales | Chlorobiaceae | Chlorobaculum | Chlorobaculum parvum | |
| 7953647 | 7953647 | PRJNA1148190_P_NODE_84687_length_590_cov_1.638298_g73555_i0 | PRJNA1148190 | 84687 | 590 | 1.638298 | 9.6659582 | Chlorobiota bacterium | 2268192 | Bacteria | Bacteria | 819 | 0 | NTclustered | gi|1958119998|gb|CP065014.1| | 2268192 | g73555 | i0 | 93.773 | 3.39152542372881 | 546 | 33 | 92 | 1 | 46 | 590 | 1263076 | 1262531 | MAG: Chlorobiota bacterium isolate Ribe_18-Q3-R11-54_MAXAC.096_cln chromosome, complete genome | blastn | 2001 | 819 | 1 | Bacteria | FCB group | Pseudomonadati | Chlorobiota | Chlorobiota bacterium | |||||
| 10502351 | 10502351 | PRJNA1148190_P_NODE_653869_length_247_cov_3.034483_g642696_i0 | PRJNA1148190 | 653869 | 247 | 3.034483 | 7.49517301 | Chlorobaculum tepidum | 1097 | Bacteria | Bacteria | 54.7 | 0.006 | NTclustered | gi|21672293|gb|AE006470.1| | 194439 | g642696 | i0 | 96.875 | 0.129554655870445 | 32 | 1 | 13 | 0 | 71 | 102 | 937105 | 937136 | Chlorobium tepidum TLS, complete genome | blastn | 32 | 54.7 | 1 | Bacteria | FCB group | Pseudomonadati | Chlorobiota | Chlorobiia | Chlorobiales | Chlorobiaceae | Chlorobaculum | Chlorobaculum tepidum | |
| 14329228 | 14329228 | PRJNA1148190_P_NODE_788192_length_241_cov_0.916667_g777019_i0 | PRJNA1148190 | 788192 | 241 | 0.916667 | 2.20916747 | Chlorobaculum limnaeum | 274537 | Bacteria | Bacteria | 115 | 2.73e-21 | NTclustered | gi|1070918267|gb|CP017305.1| | 274537 | g777019 | i0 | 82.09 | 6.50622406639004 | 134 | 24 | 56 | 0 | 103 | 236 | 2530726 | 2530593 | Chlorobaculum limnaeum strain DSM 1677 chromosome, complete genome | blastn | 1568 | 115 | 1 | Bacteria | FCB group | Pseudomonadati | Chlorobiota | Chlorobiia | Chlorobiales | Chlorobiaceae | Chlorobaculum | Chlorobaculum limnaeum | |
| 18147388 | 18147388 | PRJNA1148190_P_NODE_436195_length_279_cov_1.373786_g425022_i0 | PRJNA1148190 | 436195 | 279 | 1.373786 | 3.83286294 | Chlorobiota bacterium | 2268192 | Bacteria | Bacteria | 320 | 6.38e-83 | NTclustered | gi|1958119998|gb|CP065014.1| | 2268192 | g425022 | i0 | 91.739 | 1.39068100358423 | 230 | 19 | 82 | 0 | 3 | 232 | 33837 | 34066 | MAG: Chlorobiota bacterium isolate Ribe_18-Q3-R11-54_MAXAC.096_cln chromosome, complete genome | blastn | 388 | 320 | 1 | Bacteria | FCB group | Pseudomonadati | Chlorobiota | Chlorobiota bacterium | |||||
| 19419191 | 19419191 | PRJNA1148190_P_NODE_260516_length_338_cov_1.162264_g249346_i0 | PRJNA1148190 | 260516 | 338 | 1.162264 | 3.92845232 | Chlorobiota bacterium | 2268192 | Bacteria | Bacteria | 442 | 1.6199999999999995e-119 | NTclustered | gi|1958119998|gb|CP065014.1| | 2268192 | g249346 | i0 | 90.265 | 2.40532544378698 | 339 | 31 | 100 | 2 | 1 | 338 | 2763929 | 2764266 | MAG: Chlorobiota bacterium isolate Ribe_18-Q3-R11-54_MAXAC.096_cln chromosome, complete genome | blastn | 813 | 442 | 1 | Bacteria | FCB group | Pseudomonadati | Chlorobiota | Chlorobiota bacterium | |||||
| 23250168 | 23250168 | PRJNA1148190_P_NODE_60059_length_741_cov_1.488024_g49070_i0 | PRJNA1148190 | 60059 | 741 | 1.488024 | 11.02625784 | Chlorobiota bacterium | 2268192 | Bacteria | Bacteria | 863 | 0 | NTclustered | gi|1958119998|gb|CP065014.1| | 2268192 | g49070 | i0 | 87.805 | 9.04183535762483 | 738 | 88 | 99 | 2 | 1 | 737 | 1258934 | 1259670 | MAG: Chlorobiota bacterium isolate Ribe_18-Q3-R11-54_MAXAC.096_cln chromosome, complete genome | blastn | 6700 | 863 | 1 | Bacteria | FCB group | Pseudomonadati | Chlorobiota | Chlorobiota bacterium |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;