RNAquarium Metadata Server
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contig_metadata

7 rows where analysis = "blastn", bioproject = "PRJNA1148190" and tax_phylum = "Chlamydiota"

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tax_superkingdom 1

tax_phylum 1

  • Chlamydiota · 7 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1148190 · 7 ✖

analysis 1

  • blastn · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10502867 10502867 PRJNA1148190_P_NODE_696849_length_245_cov_1.366279_g685676_i0 PRJNA1148190 696849 245 1.366279 3.34738355 Candidatus Rhabdochlamydia porcellionis 225148 Bacteria Bacteria 348 2.5200000000000005e-91   NTclustered gi|2082223669|gb|CP075585.1| 225148 g685676 i0 92.245 2 245 19 100 0 1 245 15237 14993 Candidatus Rhabdochlamydia porcellionis strain 15C chromosome, complete genome blastn 490 348 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Candidatus Rhabdochlamydiaceae Candidatus Rhabdochlamydia Candidatus Rhabdochlamydia porcellionis
11778194 11778194 PRJNA1148190_P_NODE_737930_length_243_cov_0.905882_g726757_i0 PRJNA1148190 737930 243 0.905882 2.20129326 Candidatus Rhabdochlamydia oedothoracis 2720720 Bacteria Bacteria 377 3.18e-100   NTclustered gi|2076407543|gb|CP075587.1| 2720720 g726757 i0 94.65 3.62551440329218 243 13 100 0 1 243 1211641 1211399 Candidatus Rhabdochlamydia oedothoracis isolate W744xW776 chromosome, complete genome blastn 881 377 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Candidatus Rhabdochlamydiaceae Candidatus Rhabdochlamydia Candidatus Rhabdochlamydia oedothoracis
13048730 13048730 PRJNA1148190_P_NODE_397191_length_287_cov_1.154206_g386018_i0 PRJNA1148190 397191 287 1.154206 3.31257122 Candidatus Rhabdochlamydia porcellionis 225148 Bacteria Bacteria 531 2.799999999999999e-146   NTclustered gi|2082223669|gb|CP075585.1| 225148 g386018 i0 100 3.86062717770035 287 0 100 0 1 287 714922 715208 Candidatus Rhabdochlamydia porcellionis strain 15C chromosome, complete genome blastn 1108 531 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Candidatus Rhabdochlamydiaceae Candidatus Rhabdochlamydia Candidatus Rhabdochlamydia porcellionis
14324769 14324769 PRJNA1148190_P_NODE_451092_length_276_cov_1.458128_g439919_i0 PRJNA1148190 451092 276 1.458128 4.02443328 Simkaniaceae bacterium 2698248 Bacteria Bacteria 244 3.9e-60   NTclustered gi|2041293252|gb|CP073763.1| 2698248 g439919 i0 83.146 0.967391304347826 267 45 97 0 8 274 726445 726711 MAG: Simkaniaceae bacterium isolate M30B1 chromosome, complete genome blastn 267 244 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Simkaniaceae   Simkaniaceae bacterium
18148825 18148825 PRJNA1148190_P_NODE_541075_length_259_cov_0.887097_g529902_i0 PRJNA1148190 541075 259 0.887097 2.29758123 Candidatus Rhabdochlamydia porcellionis 225148 Bacteria Bacteria 473 4.25e-129   NTclustered gi|2082223669|gb|CP075585.1| 225148 g529902 i0 99.614 2 259 1 100 0 1 259 190293 190035 Candidatus Rhabdochlamydia porcellionis strain 15C chromosome, complete genome blastn 518 473 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Candidatus Rhabdochlamydiaceae Candidatus Rhabdochlamydia Candidatus Rhabdochlamydia porcellionis
20695177 20695177 PRJNA1148190_P_NODE_300577_length_319_cov_2.325203_g289404_i0 PRJNA1148190 300577 319 2.325203 7.41739757 Candidatus Protochlamydia naegleriophila 389348 Bacteria Bacteria 52.8 0.03   NTclustered gi|971146634|emb|LN879502.1| 389348 g289404 i0 100 0.0877742946708464 28 0 9 0 37 64 325868 325895 Protochlamydia naegleriophila genome assembly PNK1, chromosome : cPNK blastn 28 52.8 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Parachlamydiaceae Candidatus Protochlamydia Candidatus Protochlamydia naegleriophila
24523235 24523235 PRJNA1148190_P_NODE_556160_length_256_cov_1.245902_g544987_i0 PRJNA1148190 556160 256 1.245902 3.18950912 Neochlamydia sp. S13 1353976 Bacteria Bacteria 56.5 0.002   NTclustered gi|1550189844|dbj|AP017977.1| 1353976 g544987 i0 89.13 0.1796875 46 4 18 1 201 246 771008 770964 Neochlamydia sp. S13 DNA, complete genome blastn 46 56.5 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Parachlamydiaceae Neochlamydia Neochlamydia sp. S13

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;