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contig_metadata

6 rows where analysis = "blastn", bioproject = "PRJNA1148190" and tax_phylum = "Candidatus Peregrinibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Peregrinibacteriota · 6 ✖

tax_clade 1

bioproject 1

  • PRJNA1148190 · 6 ✖

analysis 1

  • blastn · 6 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1571984 1571984 PRJNA1148190_P_NODE_564222_length_254_cov_1.624309_g553049_i0 PRJNA1148190 564222 254 1.624309 4.12574486 Candidatus Peribacter riflensis 1735162 Bacteria Bacteria 52.8 0.023   NTclustered gi|946529367|gb|CP013062.1| 1735162 g553049 i0 100 0.551181102362205 28 0 11 0 20 47 270814 270787 MAG: Candidatus Peribacter riflensis, complete genome blastn 140 52.8 1 Bacteria Bacteria candidate phyla   Candidatus Peregrinibacteriota Candidatus Peribacteria Candidatus Peribacterales   Candidatus Peribacter Candidatus Peribacter riflensis
7948504 7948504 PRJNA1148190_P_NODE_423047_length_282_cov_1.086124_g411874_i0 PRJNA1148190 423047 282 1.086124 3.06286968 Candidatus Peregrinibacteria bacterium 2030811 Bacteria Bacteria 60.2 1.55e-4   NTclustered gi|2874254110|emb|OY970195.1| 2030811 g411874 i0 91.111 0.159574468085106 45 3 16 1 189 233 411726 411683 MAG: Candidatus Peregrinibacteria bacterium isolate MFD02416.bin.c.20 genome assembly, chromosome: 1 blastn 45 60.2 1 Bacteria Bacteria candidate phyla   Candidatus Peregrinibacteriota         Candidatus Peregrinibacteria bacterium
11773056 11773056 PRJNA1148190_P_NODE_348250_length_301_cov_1.350877_g337077_i0 PRJNA1148190 348250 301 1.350877 4.06613977 Candidatus Peribacteria bacterium 2053688 Bacteria Bacteria 122 2.1099999999999998e-23   NTclustered gi|2258832001|gb|CP060225.1| 2053688 g337077 i0 94.872 27.4252491694352 78 4 26 0 109 186 757314 757237 MAG: Candidatus Peribacteria bacterium isolate HK-STAS-PATE-9 chromosome, complete genome blastn 8255 122 1 Bacteria Bacteria candidate phyla   Candidatus Peregrinibacteriota Candidatus Peribacteria       Candidatus Peribacteria bacterium
18150447 18150447 PRJNA1148190_P_NODE_669255_length_247_cov_0.885057_g658082_i0 PRJNA1148190 669255 247 0.885057 2.18609079 Candidatus Peribacteria bacterium 2053688 Bacteria Bacteria 86.1 2.2e-12   NTclustered gi|2258829869|gb|CP060224.1| 2053688 g658082 i0 79.528 0.51417004048583 127 20 50 5 103 226 437022 436899 MAG: Candidatus Peribacteria bacterium isolate HK-STAS-PATE-8 chromosome blastn 127 86.1 1 Bacteria Bacteria candidate phyla   Candidatus Peregrinibacteriota Candidatus Peribacteria       Candidatus Peribacteria bacterium
18886944 18886944 PRJNA1148190_P_NODE_479035_length_271_cov_0.989899_g467862_i0 PRJNA1148190 479035 271 0.989899 2.68262629 Bacteria 2 Bacteria Bacteria 95.3 4.07e-15   NTclustered gi|1958006436|gb|CP064962.1| 2030811 g467862 i0 92.537 0.523985239852399 67 4 25 1 197 263 418489 418554 MAG: Candidatus Peregrinibacteria bacterium isolate Aved_18-Q3-R54-62_BAT3C.344 chromosome, complete genome blastn 142 95.3 1 Bacteria Bacteria candidate phyla   Candidatus Peregrinibacteriota         Candidatus Peregrinibacteria bacterium
23244769 23244769 PRJNA1148190_P_NODE_223979_length_359_cov_1.076923_g212809_i0 PRJNA1148190 223979 359 1.076923 3.86615357 Candidatus Peregrinibacteria bacterium 2030811 Bacteria Bacteria 76.8 2.02e-9   NTclustered gi|1958112918|gb|CP065009.1| 2030811 g212809 i0 100 1.90807799442897 41 0 11 0 319 359 611407 611367 MAG: Candidatus Peregrinibacteria bacterium isolate Lyne_18-Q3-R50-59_MAXAC.411_cln chromosome, complete genome blastn 685 76.8 1 Bacteria Bacteria candidate phyla   Candidatus Peregrinibacteriota         Candidatus Peregrinibacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;