RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA1148190" and tax_phylum = "Candidatus Parcubacteria"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Parcubacteria · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1148190 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5394719 5394719 PRJNA1148190_P_NODE_165605_length_409_cov_1.991071_g154437_i0 PRJNA1148190 165605 409 1.991071 8.14348039 Candidatus Parcubacteria bacterium 2762014 Bacteria Bacteria 87.9 1.08e-12   NTclustered gi|2874254054|emb|OY970378.1| 2762014 g154437 i0 85.542 0.202933985330073 83 12 20 0 186 268 768778 768860 MAG: Candidatus Parcubacteria bacterium isolate MFD01275.bin.c.8 genome assembly, chromosome: 1 blastn 83 87.9 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Candidatus Parcubacteria bacterium
24518817 24518817 PRJNA1148190_P_NODE_248660_length_344_cov_1.350554_g237490_i0 PRJNA1148190 248660 344 1.350554 4.64590576 Candidatus Parcubacteria bacterium 2762014 Bacteria Bacteria 97.1 1.48e-15   NTclustered gi|2874254054|emb|OY970378.1| 2762014 g237490 i0 87.059 0.247093023255814 85 11 25 0 237 321 768860 768776 MAG: Candidatus Parcubacteria bacterium isolate MFD01275.bin.c.8 genome assembly, chromosome: 1 blastn 85 97.1 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Candidatus Parcubacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;