RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA1148190" and tax_phylum = "Candidatus Omnitrophota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Omnitrophota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1148190 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6675157 6675157 PRJNA1148190_P_NODE_551526_length_257_cov_0.918478_g540353_i0 PRJNA1148190 551526 257 0.918478 2.36048846 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 337 5.759999999999998e-88   NTclustered gi|2621701202|emb|OY759724.1| 2035772 g540353 i0 90.31 184.715953307393 258 23 100 2 1 257 2373999 2374255 MAG: Candidatus Omnitrophota bacterium isolate 1a5844f9-839a-4d7b-a7f9-2444bab12bdd genome assembly, chromosome: 1 blastn 47472 337 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
16871973 16871973 PRJNA1148190_P_NODE_383994_length_289_cov_1.930556_g372821_i0 PRJNA1148190 383994 289 1.930556 5.57930684 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 211 4.17e-50   NTclustered gi|2621701202|emb|OY759724.1| 2035772 g372821 i0 83.628 3.2318339100346 226 36 78 1 1 225 2374430 2374655 MAG: Candidatus Omnitrophota bacterium isolate 1a5844f9-839a-4d7b-a7f9-2444bab12bdd genome assembly, chromosome: 1 blastn 934 211 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;