RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA1148190" and tax_phylum = "Candidatus Kapaibacteriota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Candidatus Kapaibacteriota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1148190 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9220144 9220144 PRJNA1148190_P_NODE_198948_length_377_cov_1.730263_g187778_i0 PRJNA1148190 198948 377 1.730263 6.52309151 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 91.6 7.61e-14   NTclustered gi|2556937695|gb|CP129493.1| 2447898 g187778 i0 90 4.40583554376658 70 7 19 0 11 80 2633233 2633302 MAG: Candidatus Kapaibacterium sp. isolate cMAG.3 chromosome, complete genome blastn 1661 91.6 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.
21974572 21974572 PRJNA1148190_P_NODE_595938_length_251_cov_0.865169_g584765_i0 PRJNA1148190 595938 251 0.865169 2.17157419 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 370 5.53e-98   NTclustered gi|2556937695|gb|CP129493.1| 2447898 g584765 i0 93.227 5.9362549800796804 251 17 100 0 1 251 2891715 2891465 MAG: Candidatus Kapaibacterium sp. isolate cMAG.3 chromosome, complete genome blastn 1490 370 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.
23246451 23246451 PRJNA1148190_P_NODE_332219_length_307_cov_1.316239_g321046_i0 PRJNA1148190 332219 307 1.316239 4.04085373 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 63.9 1.32e-5   NTclustered gi|1869359902|gb|CP058732.1| 2447898 g321046 i0 86.207 0.387622149837134 58 8 19 0 123 180 2363995 2364052 MAG: Candidatus Kapaibacterium sp. isolate Ch6 chromosome, complete genome blastn 119 63.9 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;