RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA1148190" and tax_phylum = "Candidatus Falkowiibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Falkowiibacteriota · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1148190 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6677421 6677421 PRJNA1148190_P_NODE_732806_length_243_cov_2.141176_g721633_i0 PRJNA1148190 732806 243 2.141176 5.20305768 Candidatus Falkowbacteria bacterium 2053554 Bacteria Bacteria 226 1.2199999999999999e-54   NTclustered gi|1950824677|gb|CP066698.1| 2053554 g721633 i0 84.649 1.1440329218107 228 33 93 2 13 239 595240 595466 MAG: Candidatus Falkowbacteria bacterium isolate NC_groundwater_1683_Pr3_B-0.1um_40_26 chromosome blastn 278 226 1 Bacteria Bacteria candidate phyla   Candidatus Falkowiibacteriota         Candidatus Falkowbacteria bacterium
16875467 16875467 PRJNA1148190_P_NODE_644034_length_248_cov_0.880000_g632861_i0 PRJNA1148190 644034 248 0.88 2.1824 Candidatus Falkowbacteria bacterium 2053554 Bacteria Bacteria 171 5.94e-38   NTclustered gi|1950824677|gb|CP066698.1| 2053554 g632861 i0 80.247 0.979838709677419 243 35 96 10 10 246 194494 194259 MAG: Candidatus Falkowbacteria bacterium isolate NC_groundwater_1683_Pr3_B-0.1um_40_26 chromosome blastn 243 171 1 Bacteria Bacteria candidate phyla   Candidatus Falkowiibacteriota         Candidatus Falkowbacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;