RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA1148190" and tax_phylum = "Candidatus Dormiibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Dormiibacterota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1148190 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
296486 296486 PRJNA1148190_P_NODE_493321_length_268_cov_1.246154_g482148_i0 PRJNA1148190 493321 268 1.246154 3.33969272 Candidatus Dormiibacterota bacterium 2052315 Bacteria Bacteria 154 6.54e-33   NTclustered gi|2874254030|emb|OY970355.1| 2052315 g482148 i0 85.065 1.69029850746269 154 19 57 4 117 268 1975912 1975761 MAG: Candidatus Dormibacteraeota bacterium isolate MFD10064.bin.c.1 genome assembly, chromosome: 1 blastn 453 154 1 Bacteria   Bacillati Candidatus Dormiibacterota         Candidatus Dormiibacterota bacterium
24525893 24525893 PRJNA1148190_P_NODE_769880_length_242_cov_0.911243_g758707_i0 PRJNA1148190 769880 242 0.911243 2.20520806 Candidatus Dormiibacterota bacterium 2052315 Bacteria Bacteria 76.8 1.29e-9   NTclustered gi|2874253735|emb|OY969577.1| 2052315 g758707 i0 86.765 5.00826446280992 68 9 28 0 108 175 1417456 1417523 MAG: Candidatus Dormibacteraeota bacterium isolate MFD10064.bin.c.3 genome assembly, chromosome: 1 blastn 1212 76.8 1 Bacteria   Bacillati Candidatus Dormiibacterota         Candidatus Dormiibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;