RNAquarium Metadata Server
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contig_metadata

1 row where analysis = "blastn", bioproject = "PRJNA1148190" and tax_phylum = "Candidatus Coatesiibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Coatesiibacteriota · 1 ✖

tax_clade 1

bioproject 1

  • PRJNA1148190 · 1 ✖

analysis 1

  • blastn · 1 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
19418801 19418801 PRJNA1148190_P_NODE_236056_length_351_cov_1.661871_g224886_i0 PRJNA1148190 236056 351 1.661871 5.83316721 Candidatus Coatesbacteria bacterium 2250272 Bacteria Bacteria 65.8 4.26e-6   NTclustered gi|2108058421|gb|CP070755.1| 2250272 g224886 i0 83.562 0.415954415954416 73 9 21 3 185 256 1252735 1252805 MAG: Candidatus Coatesbacteria bacterium isolate bin3 chromosome blastn 146 65.8 1 Bacteria Bacteria candidate phyla   Candidatus Coatesiibacteriota         Candidatus Coatesbacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;