RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA1148190" and tax_phylum = "Candidatus Cloacimonadota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Candidatus Cloacimonadota · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1148190 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2850683 2850683 PRJNA1148190_P_NODE_753263_length_242_cov_1.810651_g742090_i0 PRJNA1148190 753263 242 1.810651 4.38177542 Candidatus Cloacimonadota bacterium 2030808 Bacteria Bacteria 78.7 3.6e-10   NTclustered gi|2621784603|emb|OY781061.1| 2030808 g742090 i0 97.778 4.64462809917355 45 1 19 0 187 231 1149182 1149226 MAG: Candidatus Cloacimonadota bacterium isolate d61283ab-f090-4083-af93-b05ca963783c genome assembly, chromosome: 1 blastn 1124 78.7 1 Bacteria FCB group Pseudomonadati Candidatus Cloacimonadota         Candidatus Cloacimonadota bacterium
11769325 11769325 PRJNA1148190_P_NODE_11830_length_2857_cov_3.277299_g6195_i0 PRJNA1148190 11830 2857 3.277299 93.63243243 Candidatus Cloacimonadales bacterium 3060593 Bacteria Bacteria 608 1.3999999999999996e-168   NTclustered gi|2621786373|emb|OY782831.1| 3060593 g6195 i0 80.909 0.818690934546727 770 147 27 0 2088 2857 2019377 2018608 MAG: Candidatus Cloacimonadales bacterium isolate 04309a76-b7cc-48c3-85ee-0a4392eb1095 genome assembly, chromosome: 1 blastn 2339 608 1 Bacteria FCB group Pseudomonadati Candidatus Cloacimonadota Candidatus Cloacimonadia Candidatus Cloacimonadales     Candidatus Cloacimonadales bacterium
14325870 14325870 PRJNA1148190_P_NODE_526952_length_261_cov_1.638298_g515779_i0 PRJNA1148190 526952 261 1.638298 4.27595778 Candidatus Cloacimonadales bacterium 3060593 Bacteria Bacteria 56.5 0.002   NTclustered gi|2621706016|emb|OY764078.1| 3060593 g515779 i0 92.308 0.149425287356322 39 3 15 0 101 139 2411893 2411855 MAG: Candidatus Cloacimonadales bacterium isolate 02056a20-4ec6-4ab0-ab2d-03f0ed9894bb genome assembly, chromosome: 1 blastn 39 56.5 1 Bacteria FCB group Pseudomonadati Candidatus Cloacimonadota Candidatus Cloacimonadia Candidatus Cloacimonadales     Candidatus Cloacimonadales bacterium
15596411 15596411 PRJNA1148190_P_NODE_291533_length_323_cov_1.848000_g280360_i0 PRJNA1148190 291533 323 1.848 5.96904 Candidatus Cloacimonadales bacterium 3060593 Bacteria Bacteria 52.8 0.03   NTclustered gi|2626245904|emb|OY829950.1| 3060593 g280360 i0 96.774 0.0959752321981424 31 1 10 0 215 245 1451019 1451049 MAG: Candidatus Cloacimonadales bacterium isolate 55f7dba2-411d-4d06-9fab-9545568f0b98 genome assembly, chromosome: 1 blastn 31 52.8 1 Bacteria FCB group Pseudomonadati Candidatus Cloacimonadota Candidatus Cloacimonadia Candidatus Cloacimonadales     Candidatus Cloacimonadales bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;