RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA1148190" and tax_phylum = "Candidatus Binatota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Binatota · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1148190 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5393788 5393788 PRJNA1148190_P_NODE_114585_length_495_cov_0.912322_g103423_i0 PRJNA1148190 114585 495 0.912322 4.5159939 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 95.3 7.92e-15   NTclustered gi|2575803879|emb|OY729511.1| 2838779 g103423 i0 91.429 19.6686868686869 70 5 14 1 1 69 3808476 3808545 MAG: Candidatus Binatia bacterium isolate 9e32f69c-91e7-4ea3-9a30-d9bf58b5a9ec genome assembly, chromosome: 1 blastn 9736 95.3 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
16870584 16870584 PRJNA1148190_P_NODE_289374_length_324_cov_1.749004_g278203_i0 PRJNA1148190 289374 324 1.749004 5.66677296 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 54.7 0.008   NTclustered gi|2814788338|emb|OY761159.2| 2838779 g278203 i0 100 0.0895061728395062 29 0 9 0 147 175 375333 375361 MAG: Candidatus Binatia bacterium isolate a3054953-5fa8-48fb-90a5-e173aac96f7a genome assembly, chromosome: 1 blastn 29 54.7 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;