RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA1148190" and tax_phylum = "Candidatus Aminicenantota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Aminicenantota · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA1148190 · 4 ✖

analysis 1

  • blastn · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11774484 11774484 PRJNA1148190_P_NODE_44470_length_931_cov_1.839161_g33867_i0 PRJNA1148190 44470 931 1.839161 17.12258891 Candidatus Aminicenantes bacterium 2052149 Bacteria Bacteria 54.7 0.026   NTclustered gi|2108435138|gb|CP070627.1| 2052149 g33867 i0 100 0.0311493018259936 29 0 3 0 681 709 353458 353430 MAG: Candidatus Aminicenantes bacterium isolate bin99 chromosome blastn 29 54.7 1 Bacteria Bacteria candidate phyla   Candidatus Aminicenantota         Candidatus Aminicenantes bacterium
11777340 11777340 PRJNA1148190_P_NODE_663550_length_247_cov_0.885057_g652377_i0 PRJNA1148190 663550 247 0.885057 2.18609079 Candidatus Aminicenantes bacterium 2052149 Bacteria Bacteria 52.8 0.022   NTclustered gi|2108435138|gb|CP070627.1| 2052149 g652377 i0 100 0.11336032388664 28 0 11 0 200 227 8483325 8483298 MAG: Candidatus Aminicenantes bacterium isolate bin99 chromosome blastn 28 52.8 1 Bacteria Bacteria candidate phyla   Candidatus Aminicenantota         Candidatus Aminicenantes bacterium
13052271 13052271 PRJNA1148190_P_NODE_660791_length_247_cov_0.885057_g649618_i0 PRJNA1148190 660791 247 0.885057 2.18609079 Candidatus Aminicenantes bacterium 2052149 Bacteria Bacteria 91.6 4.73e-14   NTclustered gi|2874253756|emb|OY969696.1| 2052149 g649618 i0 94.828 0.234817813765182 58 3 23 0 181 238 1659251 1659308 MAG: Candidatus Aminicenantes bacterium isolate MFD04408.bin.1.14 genome assembly, chromosome: 1 blastn 58 91.6 1 Bacteria Bacteria candidate phyla   Candidatus Aminicenantota         Candidatus Aminicenantes bacterium
21977573 21977573 PRJNA1148190_P_NODE_96298_length_546_cov_1.773784_g85147_i0 PRJNA1148190 96298 546 1.773784 9.68486064 Candidatus Aminicenantes bacterium 2052149 Bacteria Bacteria 62.1 8.92e-5   NTclustered gi|2874253936|emb|OY970261.1| 2052149 g85147 i0 97.222 0.0659340659340659 36 1 7 0 401 436 881594 881629 MAG: Candidatus Aminicenantes bacterium isolate MFD04408.bin.1.29 genome assembly, chromosome: 1 blastn 36 62.1 1 Bacteria Bacteria candidate phyla   Candidatus Aminicenantota         Candidatus Aminicenantes bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;