RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA1148190" and tax_phylum = "Candidatus Altimarinota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Altimarinota · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1148190 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9225975 9225975 PRJNA1148190_P_NODE_607308_length_250_cov_0.870056_g596135_i0 PRJNA1148190 607308 250 0.870056 2.17514 Candidatus Gracilibacteria bacterium HOT-871 1540872 Bacteria Bacteria 75 4.83e-9   NTclustered gi|1275383184|gb|CP017714.1| 1540872 g596135 i0 76.978 1.208 139 26 63 2 32 167 867704 867839 Candidatus Gracilibacteria bacterium HOT-871, complete genome blastn 302 75 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Gracilibacteria bacterium HOT-871
19418613 19418613 PRJNA1148190_P_NODE_225496_length_358_cov_1.080702_g214326_i0 PRJNA1148190 225496 358 1.080702 3.86891316 Candidatus Gracilibacteria bacterium 28_42_T64 1862133 Bacteria Bacteria 124 7.079999999999999e-24   NTclustered gi|1769783243|gb|CP042461.1| 1862133 g214326 i0 84.8 4.10335195530726 125 17 35 2 14 137 1250825 1250702 Candidatus Gracilibacteria bacterium 28_42_T64 chromosome, complete genome blastn 1469 124 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Gracilibacteria bacterium 28_42_T64

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;