RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA1148190" and tax_phylum = "Bryozoa"

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tax_superkingdom 1

tax_phylum 1

  • Bryozoa · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1148190 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1573285 1573285 PRJNA1148190_P_NODE_668962_length_247_cov_0.885057_g657789_i0 PRJNA1148190 668962 247 0.885057 2.18609079 Flustra foliacea 478208 Bryozoa other_Eukaryota 54.7 0.006   NTclustered gi|160552274|gb|EU139238.1| 478208 g657789 i0 100 0.117408906882591 29 0 12 0 32 60 163 191 Flustra foliacea putative 60S ribosomal protein RPL38 mRNA, complete cds blastn 29 54.7 1 Eukaryota Opisthokonta Metazoa Bryozoa Gymnolaemata Cheilostomatida Flustridae Flustra Flustra foliacea
5402088 5402088 PRJNA1148190_P_NODE_68925_length_673_cov_3.925000_g57852_i0 PRJNA1148190 68925 673 3.925 26.41525 Membranipora membranacea 95170 Bryozoa other_Eukaryota 497 7.17e-136   NTclustered gi|2320635325|gb|ON868447.1| 95170 g57852 i0 86.374 66.4190193164933 455 62 68 0 57 511 472 18 Membranipora membranacea calmodulin-like protein 1 mRNA, complete cds blastn 44700 497 1 Eukaryota Opisthokonta Metazoa Bryozoa Gymnolaemata Cheilostomatida Membraniporidae Membranipora Membranipora membranacea
7950668 7950668 PRJNA1148190_P_NODE_581127_length_251_cov_1.466292_g569954_i0 PRJNA1148190 581127 251 1.466292 3.68039292 Watersipora subatra 2589382 Bryozoa other_Eukaryota 58.4 4.89e-4   NTclustered gi|2795709471|ref|XR_010978147.1| 2589382 g569954 i0 100 7.11553784860558 31 0 12 0 1 31 453 483 PREDICTED: Watersipora subatra uncharacterized lncRNA (LOC137391654), ncRNA blastn 1786 58.4 1 Eukaryota Opisthokonta Metazoa Bryozoa Gymnolaemata Cheilostomatida Watersiporidae Watersipora Watersipora subatra
9219420 9219420 PRJNA1148190_P_NODE_157268_length_419_cov_2.497110_g146101_i0 PRJNA1148190 157268 419 2.49711 10.4628909 Watersipora subatra 2589382 Bryozoa other_Eukaryota 54.7 0.011   NTclustered gi|2795708911|ref|XM_068077881.1| 2589382 g146101 i0 100 0.0692124105011933 29 0 7 0 56 84 939 967 PREDICTED: Watersipora subatra uncharacterized protein (LOC137391415), mRNA blastn 29 54.7 1 Eukaryota Opisthokonta Metazoa Bryozoa Gymnolaemata Cheilostomatida Watersiporidae Watersipora Watersipora subatra

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;