RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA1148190" and tax_phylum = "Balneolota"

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tax_superkingdom 1

tax_phylum 1

  • Balneolota · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1148190 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2844918 2844918 PRJNA1148190_P_NODE_32163_length_1218_cov_3.895197_g22326_i0 PRJNA1148190 32163 1218 3.895197 47.44349946 Cyclonatronum proteinivorum 1457365 Bacteria Bacteria 231 1.4899999999999995e-55   NTclustered gi|1440892538|gb|CP027806.1| 1457365 g22326 i0 97.778 2.85057471264368 135 1 11 2 86 219 758194 758327 Candidatus Cyclonatronum proteinivorum strain Omega chromosome, complete genome blastn 3472 231 1 Bacteria FCB group Pseudomonadati Balneolota Balneolia Balneolales Cyclonatronaceae Cyclonatronum Cyclonatronum proteinivorum
9221785 9221785 PRJNA1148190_P_NODE_302668_length_319_cov_0.914634_g291495_i0 PRJNA1148190 302668 319 0.914634 2.91768246 Balneolaceae bacterium 2053516 Bacteria Bacteria 54.7 0.008   NTclustered gi|2021937725|gb|CP051242.1| 2053516 g291495 i0 100 0.0909090909090909 29 0 9 0 273 301 2551516 2551544 MAG: Balneolaceae bacterium isolate ih13 chromosome blastn 29 54.7 1 Bacteria FCB group Pseudomonadati Balneolota Balneolia Balneolales Balneolaceae   Balneolaceae bacterium
18150196 18150196 PRJNA1148190_P_NODE_647815_length_248_cov_0.880000_g636642_i0 PRJNA1148190 647815 248 0.88 2.1824 Balneolaceae bacterium 2053516 Bacteria Bacteria 52.8 0.022   NTclustered gi|2166245236|dbj|LC663077.1| 2053516 g636642 i0 100 0.112903225806452 28 0 11 0 91 118 10898 10925 Balneolaceae bacterium ARSSAG-00001388 DNA, putative prophage region, clone: 00001388_pp1 blastn 28 52.8 1 Bacteria FCB group Pseudomonadati Balneolota Balneolia Balneolales Balneolaceae   Balneolaceae bacterium
20161590 20161590 PRJNA1148190_P_NODE_449316_length_276_cov_2.123153_g438143_i0 PRJNA1148190 449316 276 2.123153 5.85990228 Pseudomonadati 3379134 Bacteria Bacteria 270 6.4399999999999996e-68   NTclustered gi|1440892538|gb|CP027806.1| 1457365 g438143 i0 84.559 10.6268115942029 272 42 99 0 1 272 759123 758852 Candidatus Cyclonatronum proteinivorum strain Omega chromosome, complete genome blastn 2933 270 1 Bacteria FCB group Pseudomonadati Balneolota Balneolia Balneolales Cyclonatronaceae Cyclonatronum Cyclonatronum proteinivorum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;