RNAquarium Metadata Server
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contig_metadata

1 row where analysis = "blastn", bioproject = "PRJNA1148190" and tax_kingdom = "Sangervirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Sangervirae · 1 ✖

bioproject 1

  • PRJNA1148190 · 1 ✖

analysis 1

  • blastn · 1 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
296635 296635 PRJNA1148190_P_NODE_503481_length_266_cov_1.264249_g492308_i0 PRJNA1148190 503481 266 1.264249 3.36290234 Microviridae sp. 2202644 Viruses Viruses 270 6.1699999999999986e-68   NTclustered gi|2059689368|tpg|BK029423.1| 2202644 g492308 i0 88.393 0.842105263157895 224 26 84 0 1 224 5615 5392 MAG TPA_asm: Microviridae sp. isolate ctKc21, partial genome blastn 224 270 1 Viruses   Sangervirae Phixviricota Malgrandaviricetes Petitvirales Microviridae   Microviridae sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;