contig_metadata
16 rows where analysis = "blastn", bioproject = "PRJNA1148190" and tax_clade = "delta/epsilon subdivisions"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 4127303 | 4127303 | PRJNA1148190_P_NODE_802784_length_230_cov_2.114650_g791611_i0 | PRJNA1148190 | 802784 | 230 | 2.11465 | 4.863695 | Bradymonas sediminis | 1548548 | Bacteria | Bacteria | 63.9 | 9.49e-6 | NTclustered | gi|1406952946|gb|CP030032.1| | 1548548 | g791611 | i0 | 82.432 | 0.926086956521739 | 74 | 11 | 31 | 1 | 122 | 193 | 1050213 | 1050286 | Bradymonas sediminis strain FA350 chromosome, complete genome | blastn | 213 | 63.9 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | Bradymonadales | Bradymonadaceae | Bradymonas | Bradymonas sediminis | |||
| 5399712 | 5399712 | PRJNA1148190_P_NODE_502125_length_266_cov_1.523316_g490952_i0 | PRJNA1148190 | 502125 | 266 | 1.523316 | 4.05202056 | uncultured delta proteobacterium | 34034 | Bacteria | Bacteria | 69.4 | 2.42e-7 | NTclustered | gi|2874253659|emb|OY969087.1| | 34034 | g490952 | i0 | 100 | 0.139097744360902 | 37 | 0 | 14 | 0 | 222 | 258 | 4043896 | 4043860 | MAG: uncultured delta proteobacterium isolate MFD01721.bin.c.1 genome assembly, chromosome: 1 | blastn | 37 | 69.4 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | uncultured delta proteobacterium | ||||||
| 6672550 | 6672550 | PRJNA1148190_P_NODE_369146_length_294_cov_0.832579_g357973_i0 | PRJNA1148190 | 369146 | 294 | 0.832579 | 2.44778226 | uncultured delta proteobacterium | 34034 | Bacteria | Bacteria | 477 | 3.8e-130 | NTclustered | gi|374854163|dbj|AP011765.1| | 34034 | g357973 | i0 | 95.918 | 198.125850340136 | 294 | 12 | 100 | 0 | 1 | 294 | 14430 | 14723 | Uncultured delta proteobacterium DNA, fosmid clone: JFF046_H12 | blastn | 58249 | 477 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | uncultured delta proteobacterium | ||||||
| 7946541 | 7946541 | PRJNA1148190_P_NODE_288407_length_325_cov_1.051587_g277236_i0 | PRJNA1148190 | 288407 | 325 | 1.051587 | 3.41765775 | Bradymonas sediminis | 1548548 | Bacteria | Bacteria | 219 | 2.85e-52 | NTclustered | gi|1406952946|gb|CP030032.1| | 1548548 | g277236 | i0 | 81.887 | 75.7969230769231 | 265 | 42 | 81 | 5 | 1 | 262 | 4092621 | 4092882 | Bradymonas sediminis strain FA350 chromosome, complete genome | blastn | 24634 | 219 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | Bradymonadales | Bradymonadaceae | Bradymonas | Bradymonas sediminis | |||
| 8688790 | 8688790 | PRJNA1148190_P_NODE_568007_length_253_cov_2.177778_g556834_i0 | PRJNA1148190 | 568007 | 253 | 2.177778 | 5.50977834 | Bacteria | 2 | Bacteria | Bacteria | 217 | 7.689999999999999e-52 | NTclustered | gi|2874253659|emb|OY969087.1| | 34034 | g556834 | i0 | 82.49 | 128.774703557312 | 257 | 36 | 99 | 9 | 2 | 253 | 5713979 | 5714231 | MAG: uncultured delta proteobacterium isolate MFD01721.bin.c.1 genome assembly, chromosome: 1 | blastn | 32580 | 217 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | uncultured delta proteobacterium | ||||||
| 10499015 | 10499015 | PRJNA1148190_P_NODE_412729_length_284_cov_1.094787_g401556_i0 | PRJNA1148190 | 412729 | 284 | 1.094787 | 3.10919508 | uncultured delta proteobacterium | 34034 | Bacteria | Bacteria | 76.8 | 1.56e-9 | NTclustered | gi|2874253659|emb|OY969087.1| | 34034 | g401556 | i0 | 90 | 0.795774647887324 | 60 | 4 | 20 | 2 | 17 | 74 | 3808349 | 3808408 | MAG: uncultured delta proteobacterium isolate MFD01721.bin.c.1 genome assembly, chromosome: 1 | blastn | 226 | 76.8 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | uncultured delta proteobacterium | ||||||
| 11238878 | 11238878 | PRJNA1148190_P_NODE_535949_length_260_cov_0.882353_g524776_i0 | PRJNA1148190 | 535949 | 260 | 0.882353 | 2.2941178 | Thermodesulfobacteriota | 200940 | Bacteria | Bacteria | 222 | 1.71e-53 | NTclustered | gi|2874253674|emb|OY969108.1| | 34034 | g524776 | i0 | 91.566 | 59.6923076923077 | 166 | 7 | 63 | 5 | 49 | 212 | 2201694 | 2201534 | MAG: uncultured delta proteobacterium isolate MFD01828.bin.c.1 genome assembly, chromosome: 1 | blastn | 15520 | 224 | 0.991071428571429 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | uncultured delta proteobacterium | ||||||
| 12513695 | 12513695 | PRJNA1148190_P_NODE_376550_length_291_cov_1.486239_g365377_i0 | PRJNA1148190 | 376550 | 291 | 1.486239 | 4.32495549 | Bacteria | 2 | Bacteria | Bacteria | 239 | 1.93e-58 | NTclustered | gi|2874253659|emb|OY969087.1| | 34034 | g365377 | i0 | 81.507 | 19.9587628865979 | 292 | 52 | 100 | 2 | 1 | 291 | 6948111 | 6948401 | MAG: uncultured delta proteobacterium isolate MFD01721.bin.c.1 genome assembly, chromosome: 1 | blastn | 5808 | 241 | 0.991701244813278 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | uncultured delta proteobacterium | ||||||
| 13054055 | 13054055 | PRJNA1148190_P_NODE_803391_length_229_cov_2.589744_g792218_i0 | PRJNA1148190 | 803391 | 229 | 2.589744 | 5.93051376 | uncultured delta proteobacterium | 34034 | Bacteria | Bacteria | 196 | 8.92e-46 | NTclustered | gi|2874253674|emb|OY969108.1| | 34034 | g792218 | i0 | 82.883 | 24.1135371179039 | 222 | 34 | 96 | 4 | 8 | 227 | 2386328 | 2386547 | MAG: uncultured delta proteobacterium isolate MFD01828.bin.c.1 genome assembly, chromosome: 1 | blastn | 5522 | 196 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | uncultured delta proteobacterium | ||||||
| 18150718 | 18150718 | PRJNA1148190_P_NODE_691135_length_246_cov_0.890173_g679962_i0 | PRJNA1148190 | 691135 | 246 | 0.890173 | 2.18982558 | uncultured delta proteobacterium | 34034 | Bacteria | Bacteria | 178 | 3.5099999999999993e-40 | NTclustered | gi|2874253659|emb|OY969087.1| | 34034 | g679962 | i0 | 80.08 | 26.6138211382114 | 251 | 40 | 100 | 9 | 1 | 246 | 569152 | 569397 | MAG: uncultured delta proteobacterium isolate MFD01721.bin.c.1 genome assembly, chromosome: 1 | blastn | 6547 | 178 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | uncultured delta proteobacterium | ||||||
| 19420685 | 19420685 | PRJNA1148190_P_NODE_357296_length_298_cov_1.026667_g346123_i0 | PRJNA1148190 | 357296 | 298 | 1.026667 | 3.05946766 | uncultured delta proteobacterium | 34034 | Bacteria | Bacteria | 239 | 1.98e-58 | NTclustered | gi|2874253659|emb|OY969087.1| | 34034 | g346123 | i0 | 83.525 | 56.3288590604027 | 261 | 38 | 87 | 3 | 1 | 260 | 5575420 | 5575164 | MAG: uncultured delta proteobacterium isolate MFD01721.bin.c.1 genome assembly, chromosome: 1 | blastn | 16786 | 239 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | uncultured delta proteobacterium | ||||||
| 21975237 | 21975237 | PRJNA1148190_P_NODE_649598_length_248_cov_0.880000_g638425_i0 | PRJNA1148190 | 649598 | 248 | 0.88 | 2.1824 | Persicimonas caeni | 2292766 | Bacteria | Bacteria | 73.1 | 1.72e-8 | NTclustered | gi|1695542189|gb|CP041186.1| | 2292766 | g638425 | i0 | 77.344 | 1.03225806451613 | 128 | 25 | 51 | 4 | 1 | 126 | 397293 | 397168 | Persicimonas caeni strain YN101 chromosome | blastn | 256 | 73.1 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | Bradymonadales | Bradymonadaceae | Persicimonas | Persicimonas caeni | |||
| 21976835 | 21976835 | PRJNA1148190_P_NODE_775858_length_241_cov_1.375000_g764685_i0 | PRJNA1148190 | 775858 | 241 | 1.375 | 3.31375 | uncultured delta proteobacterium | 34034 | Bacteria | Bacteria | 414 | 2.3999999999999993e-111 | NTclustered | gi|511202521|gb|KC994752.1| | 34034 | g764685 | i0 | 97.925 | 99.9170124481328 | 241 | 1 | 100 | 1 | 1 | 241 | 468 | 232 | Uncultured delta proteobacterium clone BF 072 16S ribosomal RNA gene, partial sequence | blastn | 24080 | 414 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | uncultured delta proteobacterium | ||||||
| 22711694 | 22711694 | PRJNA1148190_P_NODE_324938_length_310_cov_1.135021_g313765_i0 | PRJNA1148190 | 324938 | 310 | 1.135021 | 3.5185651 | Bacteria | 2 | Bacteria | Bacteria | 104 | 7.88e-18 | NTclustered | gi|2190143862|gb|CP085041.1| | 1750598 | g313765 | i0 | 90.909 | 31.0354838709677 | 77 | 7 | 25 | 0 | 150 | 226 | 836224 | 836148 | Dissulfurimicrobium hydrothermale strain Sh68 chromosome, complete genome | blastn | 9621 | 104 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | Dissulfurimicrobium | Dissulfurimicrobium hydrothermale | |||||
| 23251494 | 23251494 | PRJNA1148190_P_NODE_711259_length_245_cov_0.895349_g700086_i0 | PRJNA1148190 | 711259 | 245 | 0.895349 | 2.19360505 | Persicimonas caeni | 2292766 | Bacteria | Bacteria | 167 | 7.57e-37 | NTclustered | gi|1695542189|gb|CP041186.1| | 2292766 | g700086 | i0 | 81.34 | 3.54285714285714 | 209 | 36 | 85 | 3 | 2 | 209 | 6277731 | 6277525 | Persicimonas caeni strain YN101 chromosome | blastn | 868 | 167 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | Bradymonadales | Bradymonadaceae | Persicimonas | Persicimonas caeni | |||
| 23987628 | 23987628 | PRJNA1148190_P_NODE_470279_length_272_cov_1.703518_g459106_i0 | PRJNA1148190 | 470279 | 272 | 1.703518 | 4.63356896 | root | 1 | Root_unresolved | Root_unresolved | 503 | 5.729999999999998e-138 | NTclustered | gi|1139283245|emb|LT697265.1| | 34034 | g459106 | i0 | 100 | 99.6727941176471 | 272 | 0 | 100 | 0 | 1 | 272 | 16 | 287 | uncultured delta proteobacterium partial 16S rRNA gene, isolate 10T_22683 | blastn | 27111 | 503 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | uncultured delta proteobacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;