RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA1148190" and tax_clade = "Pithoviruses"

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tax_superkingdom 1

tax_clade 1

  • Pithoviruses · 2 ✖

bioproject 1

  • PRJNA1148190 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13044926 13044926 PRJNA1148190_P_NODE_151691_length_427_cov_1.305085_g140524_i0 PRJNA1148190 151691 427 1.305085 5.57271295 Solivirus sp. 2487772 Viruses Viruses 52.8 0.041   NTclustered gi|1512481561|gb|MK072489.1| 2487772 g140524 i0 100 0.0655737704918033 28 0 7 0 70 97 15250 15223 MAG: Solivirus sp. clone Solivirus_1 genomic sequence blastn 28 52.8 1 Viruses Pithoviruses             Solivirus sp.
24518545 24518545 PRJNA1148190_P_NODE_231780_length_354_cov_1.096085_g220610_i0 PRJNA1148190 231780 354 1.096085 3.8801409 Pithovirus LCPAC001 2506585 Viruses Viruses 58.4 7.2e-4   NTclustered gi|1588063028|gb|MK500429.1| 2506585 g220610 i0 100 0.488700564971751 31 0 9 0 210 240 1620 1650 MAG: Pithovirus LCPAC001 genomic sequence blastn 173 58.4 1 Viruses Pithoviruses             Pithovirus LCPAC001

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;