RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA1148190" and tax_clade = "Nitrospinota/Tectimicrobiota group"

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tax_superkingdom 1

tax_kingdom 1

tax_clade 1

  • Nitrospinota/Tectimicrobiota group · 2 ✖

bioproject 1

  • PRJNA1148190 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
19424662 19424662 PRJNA1148190_P_NODE_648856_length_248_cov_0.880000_g637683_i0 PRJNA1148190 648856 248 0.88 2.1824 Nitrospinaceae bacterium 2358456 Bacteria Bacteria 82.4 2.86e-11   NTclustered gi|2107941210|gb|CP070799.1| 2358456 g637683 i0 90.323 25.6451612903226 62 6 25 0 30 91 1674170 1674231 MAG: Nitrospinaceae bacterium isolate bin1391 chromosome blastn 6360 82.4 1 Bacteria Nitrospinota/Tectimicrobiota group Pseudomonadati Nitrospinota Nitrospinia Nitrospinales Nitrospinaceae   Nitrospinaceae bacterium
22713335 22713335 PRJNA1148190_P_NODE_799458_length_233_cov_2.350000_g788285_i0 PRJNA1148190 799458 233 2.35 5.4755 Pseudomonadati 3379134 Bacteria Bacteria 222 1.4999999999999999e-53   NTclustered gi|2518596677|emb|OX639990.1| 312019 g788285 i0 84.211 4.0343347639485 228 36 98 0 6 233 3426714 3426487 MAG: uncultured Candidatus Entotheonella sp. isolate 26b0520c-cf9d-432e-a440-87a3e388b1d5 genome assembly, chromosome: 1 blastn 940 222 1 Bacteria Nitrospinota/Tectimicrobiota group Pseudomonadati Candidatus Tectimicrobiota Candidatus Entotheonellia Candidatus Entotheonellales Candidatus Entotheonellaceae Candidatus Entotheonella uncultured Candidatus Entotheonella sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;