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contig_metadata

21 rows where analysis = "blastn", bioproject = "PRJNA1148190" and tax_clade = "Methanomada group"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Methanomada group · 21 ✖

bioproject 1

  • PRJNA1148190 · 21 ✖

analysis 1

  • blastn · 21 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
298404 298404 PRJNA1148190_P_NODE_641141_length_248_cov_0.880000_g629968_i0 PRJNA1148190 641141 248 0.88 2.1824 Methanobacterium formicicum 2162 Archaea Archaea 442 1.1399999999999995e-119   NTclustered gi|693274827|gb|CP006933.1| 2162 g629968 i0 98.79 3.98387096774194 248 3 100 0 1 248 982321 982074 Methanobacterium formicicum strain BRM9, complete genome blastn 988 442 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobacterium Methanobacterium formicicum
299604 299604 PRJNA1148190_P_NODE_741061_length_243_cov_0.905882_g729888_i0 PRJNA1148190 741061 243 0.905882 2.20129326 Methanobrevibacter acididurans 120963 Archaea Archaea 449 6.65e-122   NTclustered gi|2871247231|gb|CP166991.1| 120963 g729888 i0 100 1.81481481481481 243 0 100 0 1 243 1462158 1462400 Methanobrevibacter acididurans strain DSM 15163 chromosome, complete genome blastn 441 449 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter acididurans
2311148 2311148 PRJNA1148190_P_NODE_626502_length_249_cov_0.875000_g615329_i0 PRJNA1148190 626502 249 0.875 2.17875 Methanobrevibacter 2172 Archaea Archaea 460 3.16e-125   NTclustered gi|2188913606|dbj|AP025587.1| 2173 g615329 i0 100 7 249 0 100 0 1 249 779377 779625 Methanobrevibacter smithii CE91-St68 DNA, complete genome blastn 1743 460 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter smithii
4122747 4122747 PRJNA1148190_P_NODE_447404_length_277_cov_1.200980_g436231_i0 PRJNA1148190 447404 277 1.20098 3.3267146 uncultured Methanobacterium sp. 176306 Archaea Archaea 429 1.0099999999999999e-115   NTclustered gi|2621703503|emb|OY762552.1| 176306 g436231 i0 94.585 6.014440433213 277 15 100 0 1 277 306956 307232 MAG: uncultured Methanobacterium sp. isolate 3f2017ab-9e69-417f-80a5-32741c1572f8 genome assembly, chromosome: 1 blastn 1666 429 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobacterium uncultured Methanobacterium sp.
5400507 5400507 PRJNA1148190_P_NODE_561665_length_255_cov_1.126374_g550492_i0 PRJNA1148190 561665 255 1.126374 2.8722537 Methanobrevibacter smithii 2173 Archaea Archaea 466 6.98e-127   NTclustered gi|2188913606|dbj|AP025587.1| 2173 g550492 i0 99.608 6.98823529411765 255 1 100 0 1 255 24552 24806 Methanobrevibacter smithii CE91-St68 DNA, complete genome blastn 1782 466 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter smithii
6674188 6674188 PRJNA1148190_P_NODE_482066_length_270_cov_1.390863_g470893_i0 PRJNA1148190 482066 270 1.390863 3.7553301 Methanobrevibacter sp. TLL-48-HuF1 2870563 Archaea Archaea 488 1.5899999999999995e-133   NTclustered gi|2246976648|gb|CP081485.1| 2870563 g470893 i0 99.259 6.64444444444444 270 2 100 0 1 270 114770 115039 Methanobrevibacter sp. TLL-48-HuF1 chromosome, complete genome blastn 1794 488 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp. TLL-48-HuF1
7948978 7948978 PRJNA1148190_P_NODE_457367_length_275_cov_1.237624_g446194_i0 PRJNA1148190 457367 275 1.237624 3.403466 Methanobrevibacter smithii 2173 Archaea Archaea 483 7.559999999999998e-132   NTclustered gi|2188913606|dbj|AP025587.1| 2173 g446194 i0 98.545 6.90909090909091 275 1 100 1 1 275 1351703 1351432 Methanobrevibacter smithii CE91-St68 DNA, complete genome blastn 1900 483 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter smithii
7951075 7951075 PRJNA1148190_P_NODE_611687_length_250_cov_0.870056_g600514_i0 PRJNA1148190 611687 250 0.870056 2.17514 Methanosphaera stadtmanae 2317 Archaea Archaea 435 1.92e-117   NTclustered gi|1721134173|emb|LR698975.1| 2317 g600514 i0 98 1.624 250 5 100 0 1 250 1574033 1574282 Methanosphaera stadtmanae isolate MGYG-HGUT-02164 genome assembly, chromosome: 1 blastn 406 435 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanosphaera Methanosphaera stadtmanae
8689163 8689163 PRJNA1148190_P_NODE_699247_length_245_cov_0.895349_g688074_i0 PRJNA1148190 699247 245 0.895349 2.19360505 Methanobrevibacter 2172 Archaea Archaea 448 2.41e-121   NTclustered gi|2791693311|gb|CP144200.1| 2173 g688074 i0 99.592 7.93469387755102 245 1 100 0 1 245 1267327 1267571 Methanobrevibacter smithii strain GRAZ-2 chromosome, complete genome blastn 1944 448 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter smithii
10495951 10495951 PRJNA1148190_P_NODE_213809_length_366_cov_1.313993_g202639_i0 PRJNA1148190 213809 366 1.313993 4.80921438 Methanobrevibacter millerae 230361 Archaea Archaea 52.8 0.035   NTclustered gi|968564921|gb|CP011266.1| 230361 g202639 i0 100 0.0765027322404372 28 0 8 0 247 274 409297 409324 Methanobrevibacter millerae strain SM9, complete genome blastn 28 52.8 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter millerae
10499497 10499497 PRJNA1148190_P_NODE_445969_length_277_cov_1.455882_g434796_i0 PRJNA1148190 445969 277 1.455882 4.03279314 Methanobrevibacter arboriphilus 39441 Archaea Archaea 58.4 5.48e-4   NTclustered gi|2047640843|dbj|AP019779.1| 39441 g434796 i0 92.683 0.148014440433213 41 2 15 1 171 211 24512 24473 Methanobrevibacter arboriphilus SA DNA, complete genome blastn 41 58.4 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter arboriphilus
11773581 11773581 PRJNA1148190_P_NODE_384350_length_289_cov_1.745370_g373177_i0 PRJNA1148190 384350 289 1.74537 5.0441193 uncultured Methanobacteriaceae archaeon 176233 Archaea Archaea 156 1.98e-33   NTclustered gi|2874253795|emb|OY969779.1| 176233 g373177 i0 86.111 0.498269896193772 144 20 50 0 146 289 2548495 2548352 MAG: uncultured Methanobacteriaceae archaeon isolate MFD04716.bin.c.1 genome assembly, chromosome: 1 blastn 144 156 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae   uncultured Methanobacteriaceae archaeon
12514106 12514106 PRJNA1148190_P_NODE_486870_length_269_cov_1.464286_g475697_i0 PRJNA1148190 486870 269 1.464286 3.93892934 Methanococcus 2184 Archaea Archaea 52.8 0.025   NTclustered gi|2891706660|gb|CP178162.1| 39152 g475697 i0 100 0.41635687732342 28 0 10 0 135 162 318727 318700 Methanococcus maripaludis strain LL chromosome, complete genome blastn 112 52.8 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanococci Methanococcales Methanococcaceae Methanococcus Methanococcus maripaludis
15595764 15595764 PRJNA1148190_P_NODE_249773_length_343_cov_2.170370_g238603_i0 PRJNA1148190 249773 343 2.17037 7.4443691 Methanobrevibacter smithii 2173 Archaea Archaea 172 2.39e-38   NTclustered gi|2791693311|gb|CP144200.1| 2173 g238603 i0 76.656 49.3935860058309 317 71 92 3 8 323 195673 195359 Methanobrevibacter smithii strain GRAZ-2 chromosome, complete genome blastn 16942 172 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter smithii
16338945 16338945 PRJNA1148190_P_NODE_88373_length_575_cov_1.629482_g77239_i0 PRJNA1148190 88373 575 1.629482 9.3695215 Methanobacterium 2160 Archaea Archaea 56.5 0.004   NTclustered gi|1297867845|gb|CP017766.1| 59277 g77239 i0 100 0.156521739130435 30 0 5 0 34 63 1974788 1974759 Methanobacterium subterraneum strain MO-MB1 chromosome, complete genome blastn 90 56.5 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobacterium Methanobacterium subterraneum
16875720 16875720 PRJNA1148190_P_NODE_664214_length_247_cov_0.885057_g653041_i0 PRJNA1148190 664214 247 0.885057 2.18609079 Methanobrevibacter smithii 2173 Archaea Archaea 457 4.05e-124   NTclustered gi|2188913606|dbj|AP025587.1| 2173 g653041 i0 100 7 247 0 100 0 1 247 910885 911131 Methanobrevibacter smithii CE91-St68 DNA, complete genome blastn 1729 457 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter smithii
18151919 18151919 PRJNA1148190_P_NODE_788115_length_241_cov_0.916667_g776942_i0 PRJNA1148190 788115 241 0.916667 2.20916747 Methanobrevibacter arboriphilus 39441 Archaea Archaea 446 8.519999999999999e-121   NTclustered gi|2047640843|dbj|AP019779.1| 39441 g776942 i0 100 1.95020746887967 241 0 100 0 1 241 2357753 2357513 Methanobrevibacter arboriphilus SA DNA, complete genome blastn 470 446 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter arboriphilus
19423761 19423761 PRJNA1148190_P_NODE_578456_length_251_cov_2.219101_g567283_i0 PRJNA1148190 578456 251 2.219101 5.56994351 Methanobrevibacter smithii 2173 Archaea Archaea 448 2.48e-121   NTclustered gi|2188913606|dbj|AP025587.1| 2173 g567283 i0 98.805 3.31872509960159 251 3 100 0 1 251 1045349 1045599 Methanobrevibacter smithii CE91-St68 DNA, complete genome blastn 833 448 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter smithii
21975422 21975422 PRJNA1148190_P_NODE_662898_length_247_cov_0.885057_g651725_i0 PRJNA1148190 662898 247 0.885057 2.18609079 Methanobrevibacter smithii 2173 Archaea Archaea 451 1.88e-122   NTclustered gi|1294447101|gb|CP017803.1| 2173 g651725 i0 99.595 5.92712550607287 247 1 100 0 1 247 1385124 1385370 Methanobrevibacter smithii strain KB11 chromosome, complete genome blastn 1464 451 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter smithii
22713225 22713225 PRJNA1148190_P_NODE_766498_length_242_cov_0.911243_g755325_i0 PRJNA1148190 766498 242 0.911243 2.20520806 Methanobrevibacter 2172 Archaea Archaea 448 2.3799999999999995e-121   NTclustered gi|2791693311|gb|CP144200.1| 2173 g755325 i0 100 7 242 0 100 0 1 242 968179 968420 Methanobrevibacter smithii strain GRAZ-2 chromosome, complete genome blastn 1694 448 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter smithii
23250465 23250465 PRJNA1148190_P_NODE_626679_length_249_cov_0.875000_g615506_i0 PRJNA1148190 626679 249 0.875 2.17875 Methanobrevibacter sp. TLL-48-HuF1 2870563 Archaea Archaea 433 6.89e-117   NTclustered gi|2246976648|gb|CP081485.1| 2870563 g615506 i0 97.992 1 249 5 100 0 1 249 267207 267455 Methanobrevibacter sp. TLL-48-HuF1 chromosome, complete genome blastn 249 433 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp. TLL-48-HuF1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;