contig_metadata
22 rows where analysis = "blastn", bioproject = "PRJNA1146029" and tax_phylum = "Verrucomicrobiota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1033686 | 1033686 | PRJNA1146029_P_NODE_9781_length_292_cov_1.168950_g9500_i0 | PRJNA1146029 | 9781 | 292 | 1.16895 | 3.413334 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 82.4 | 3.45e-11 | NTclustered | gi|164510703|emb|AJ966882.1| | 48467 | g9500 | i0 | 97.872 | 27.1198630136986 | 47 | 1 | 16 | 0 | 1 | 47 | 3690 | 3644 | Prosthecobacter debontii 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ala gene, tRNA-Ile gene and ITS1, strain DSM 14044 | blastn | 7919 | 82.4 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Prosthecobacter | Prosthecobacter debontii | |
| 1564645 | 1564645 | PRJNA1146029_P_NODE_11862_length_279_cov_1.339806_g11581_i0 | PRJNA1146029 | 11862 | 279 | 1.339806 | 3.73805874 | Congregicoccus parvus | 3081749 | Bacteria | Bacteria | 195 | 4.03e-45 | NTclustered | gi|2599616993|dbj|AP028972.1| | 3081749 | g11581 | i0 | 81.224 | 45.4444444444444 | 245 | 42 | 87 | 4 | 36 | 278 | 5717537 | 5717295 | Opitutales bacterium ASA1 DNA, complete genome | blastn | 12679 | 195 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Alterococcaceae | Congregicoccus | Congregicoccus parvus | |
| 4116967 | 4116967 | PRJNA1146029_P_NODE_1044_length_879_cov_2.267990_g826_i0 | PRJNA1146029 | 1044 | 879 | 2.26799 | 19.9356321 | Luteolibacter luteus | 2728835 | Bacteria | Bacteria | 1386 | 0 | NTclustered | gi|1835317346|gb|CP051774.1| | 2728835 | g826 | i0 | 95.108 | 287.849829351536 | 879 | 43 | 100 | 0 | 1 | 879 | 3804816 | 3803938 | Luteolibacter luteus strain G-1-1-1 chromosome, complete genome | blastn | 253020 | 1386 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Luteolibacter | Luteolibacter luteus | |
| 4116989 | 4116989 | PRJNA1146029_P_NODE_11764_length_279_cov_5.451456_g11483_i0 | PRJNA1146029 | 11764 | 279 | 5.451456 | 15.20956224 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 516 | 7.58e-142 | NTclustered | gi|2754040313|dbj|LC785860.1| | 2026799 | g11483 | i0 | 100 | 100.659498207885 | 279 | 0 | 100 | 0 | 1 | 279 | 532 | 810 | Verrucomicrobiota bacterium AR-M27MN gene for 16S rRNA, partial sequence | blastn | 28084 | 516 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 4861717 | 4861717 | PRJNA1146029_P_NODE_10624_length_286_cov_2.746479_g10343_i0 | PRJNA1146029 | 10624 | 286 | 2.746479 | 7.85492994 | Candidatus Xiphinematobacter | 134550 | Bacteria | Bacteria | 372 | 1.79e-98 | NTclustered | gi|939198278|gb|CP012665.1| | 1704307 | g10343 | i0 | 90.244 | 128.346153846154 | 287 | 25 | 100 | 3 | 1 | 286 | 15598 | 15314 | Candidatus Xiphinematobacter sp. Idaho Grape, complete genome | blastn | 36707 | 372 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Spartobacteria | Candidatus Xiphinematobacter | Candidatus Xiphinematobacter sp. Idaho Grape | |||
| 6667889 | 6667889 | PRJNA1146029_P_NODE_12406_length_275_cov_1.836634_g12125_i0 | PRJNA1146029 | 12406 | 275 | 1.836634 | 5.0507435 | uncultured Verrucomicrobiota bacterium | 156588 | Bacteria | Bacteria | 226 | 1.41e-54 | NTclustered | gi|226525339|gb|FJ872375.1| | 156588 | g12125 | i0 | 81.786 | 51.5418181818182 | 280 | 42 | 100 | 8 | 1 | 275 | 27053 | 27328 | Uncultured Verrucomicrobia bacterium clone 286 genomic sequence | blastn | 14174 | 226 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | uncultured Verrucomicrobiota bacterium | |||||
| 6668123 | 6668123 | PRJNA1146029_P_NODE_646_length_1126_cov_3.069326_g473_i0 | PRJNA1146029 | 646 | 1126 | 3.069326 | 34.56061076 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 1170 | 0 | NTclustered | gi|2874253952|emb|OY970277.1| | 412056 | g473 | i0 | 86.785 | 145.634103019538 | 1067 | 120 | 94 | 20 | 66 | 1122 | 2750504 | 2749449 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04580.bin.1.45 genome assembly, chromosome: 1 | blastn | 163984 | 1170 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 8686781 | 8686781 | PRJNA1146029_P_NODE_627_length_1149_cov_13.866171_g454_i0 | PRJNA1146029 | 627 | 1149 | 13.866171 | 159.32230479 | Opitutaceae | 134623 | Bacteria | Bacteria | 1604 | 0 | NTclustered | gi|2724066732|gb|CP109796.1| | 1184151 | g454 | i0 | 91.927 | 168.917319408181 | 1152 | 83 | 99 | 9 | 3 | 1149 | 5637602 | 5636456 | Termitidicoccus mucosus strain TSB47 chromosome, complete genome | blastn | 194086 | 1613 | 0.994420334779913 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Termitidicoccus | Termitidicoccus mucosus | |
| 9218115 | 9218115 | PRJNA1146029_P_NODE_18968_length_246_cov_1.138728_g18687_i0 | PRJNA1146029 | 18968 | 246 | 1.138728 | 2.80127088 | uncultured Verrucomicrobiota bacterium | 156588 | Bacteria | Bacteria | 337 | 5.479999999999998e-88 | NTclustered | gi|226525288|gb|FJ872373.1| | 156588 | g18687 | i0 | 93.392 | 233.418699186992 | 227 | 15 | 92 | 0 | 20 | 246 | 16055 | 15829 | Uncultured Verrucomicrobia bacterium clone 118 genomic sequence | blastn | 57421 | 337 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | uncultured Verrucomicrobiota bacterium | |||||
| 10493860 | 10493860 | PRJNA1146029_P_NODE_4089_length_423_cov_3.848571_g3811_i0 | PRJNA1146029 | 4089 | 423 | 3.848571 | 16.27945533 | uncultured Verrucomicrobiota bacterium | 156588 | Bacteria | Bacteria | 383 | 1.2699999999999998e-101 | NTclustered | gi|226525288|gb|FJ872373.1| | 156588 | g3811 | i0 | 83.488 | 155.697399527187 | 430 | 51 | 100 | 18 | 1 | 423 | 15430 | 15846 | Uncultured Verrucomicrobia bacterium clone 118 genomic sequence | blastn | 65860 | 383 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | uncultured Verrucomicrobiota bacterium | |||||
| 11768653 | 11768653 | PRJNA1146029_P_NODE_1170_length_824_cov_2.529960_g935_i0 | PRJNA1146029 | 1170 | 824 | 2.52996 | 20.8468704 | Luteolibacter sp. AS25 | 3135776 | Bacteria | Bacteria | 1319 | 0 | NTclustered | gi|2889346039|gb|CP151837.1| | 3135776 | g935 | i0 | 95.531 | 288.730582524272 | 828 | 32 | 100 | 4 | 1 | 824 | 457053 | 456227 | Luteolibacter sp. AS25 chromosome, complete genome | blastn | 237914 | 1319 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Luteolibacter | Luteolibacter sp. AS25 | |
| 11768912 | 11768912 | PRJNA1146029_P_NODE_690_length_1098_cov_2.040976_g511_i0 | PRJNA1146029 | 690 | 1098 | 2.040976 | 22.40991648 | Prosthecobacter fusiformis | 48464 | Bacteria | Bacteria | 1685 | 0 | NTclustered | gi|12583974|gb|AF245378.1|AF245378 | 48464 | g511 | i0 | 94.369 | 272.765027322404 | 1101 | 56 | 100 | 6 | 1 | 1098 | 1296 | 199 | Prosthecobacter fusiformis 23S ribosomal RNA gene, partial sequence | blastn | 299496 | 1685 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Prosthecobacter | Prosthecobacter fusiformis | |
| 13043770 | 13043770 | PRJNA1146029_P_NODE_18371_length_247_cov_1.229885_g18090_i0 | PRJNA1146029 | 18371 | 247 | 1.229885 | 3.03781595 | Verrucomicrobia bacterium enrichment culture clone Lt-H7 | 863496 | Bacteria | Bacteria | 457 | 4.05e-124 | NTclustered | gi|306569404|gb|GQ902886.1| | 863496 | g18090 | i0 | 100 | 99.1214574898785 | 247 | 0 | 100 | 0 | 1 | 247 | 95 | 341 | Verrucomicrobia bacterium enrichment culture clone Lt-H7 16S ribosomal RNA gene, partial sequence | blastn | 24483 | 457 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobia bacterium enrichment culture clone Lt-H7 | |||||
| 15061407 | 15061407 | PRJNA1146029_P_NODE_7172_length_333_cov_2.815385_g6894_i0 | PRJNA1146029 | 7172 | 333 | 2.815385 | 9.37523205 | Verrucomicrobiota | 74201 | Bacteria | Bacteria | 505 | 1.9999999999999995e-138 | NTclustered | gi|2874254065|emb|OY970130.1| | 412056 | g6894 | i0 | 94.012 | 196.918918918919 | 334 | 19 | 100 | 1 | 1 | 333 | 5153208 | 5152875 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD05705.bin.c.1 genome assembly, chromosome: 1 | blastn | 65574 | 510 | 0.990196078431373 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 15593075 | 15593075 | PRJNA1146029_P_NODE_3853_length_435_cov_2.044199_g3575_i0 | PRJNA1146029 | 3853 | 435 | 2.044199 | 8.89226565 | uncultured Verrucomicrobiota bacterium | 156588 | Bacteria | Bacteria | 436 | 9.93e-118 | NTclustered | gi|226525288|gb|FJ872373.1| | 156588 | g3575 | i0 | 84.966 | 257.519540229885 | 439 | 56 | 100 | 10 | 1 | 435 | 15401 | 15833 | Uncultured Verrucomicrobia bacterium clone 118 genomic sequence | blastn | 112021 | 436 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | uncultured Verrucomicrobiota bacterium | |||||
| 18141698 | 18141698 | PRJNA1146029_P_NODE_11355_length_282_cov_1.473684_g11074_i0 | PRJNA1146029 | 11355 | 282 | 1.473684 | 4.15578888 | Oleiharenicola sp. Vm1 | 3398393 | Bacteria | Bacteria | 477 | 3.6199999999999986e-130 | NTclustered | gi|2912653302|gb|CP180537.1| | 3398393 | g11074 | i0 | 97.163 | 103.067375886525 | 282 | 8 | 100 | 0 | 1 | 282 | 3557204 | 3556923 | Oleiharenicola sp. Vm1 chromosome, complete genome | blastn | 29065 | 477 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Oleiharenicola | Oleiharenicola sp. Vm1 | |
| 19416341 | 19416341 | PRJNA1146029_P_NODE_8416_length_312_cov_1.627615_g8135_i0 | PRJNA1146029 | 8416 | 312 | 1.627615 | 5.0781588 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 377 | 4.24e-100 | NTclustered | gi|2874254065|emb|OY970130.1| | 412056 | g8135 | i0 | 88.462 | 107.451923076923 | 312 | 36 | 100 | 0 | 1 | 312 | 5152707 | 5152396 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD05705.bin.c.1 genome assembly, chromosome: 1 | blastn | 33525 | 377 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 19416360 | 19416360 | PRJNA1146029_P_NODE_9716_length_293_cov_0.759091_g9435_i0 | PRJNA1146029 | 9716 | 293 | 0.759091 | 2.22413663 | Akkermansiaceae bacterium | 2562705 | Bacteria | Bacteria | 429 | 1.07e-115 | NTclustered | gi|2022020957|gb|CP059069.1| | 2562705 | g9435 | i0 | 93.174 | 284.853242320819 | 293 | 18 | 99 | 2 | 1 | 292 | 3411874 | 3412165 | Akkermansiaceae bacterium strain AJA081-3 chromosome, complete genome | blastn | 83462 | 429 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Akkermansiaceae | Akkermansiaceae bacterium | ||
| 21966881 | 21966881 | PRJNA1146029_P_NODE_1458_length_733_cov_3.646970_g1208_i0 | PRJNA1146029 | 1458 | 733 | 3.64697 | 26.7322901 | Luteolibacter sp. AS25 | 3135776 | Bacteria | Bacteria | 1112 | 0 | NTclustered | gi|2889346039|gb|CP151837.1| | 3135776 | g1208 | i0 | 94.022 | 291.165075034106 | 736 | 41 | 100 | 2 | 1 | 733 | 456154 | 455419 | Luteolibacter sp. AS25 chromosome, complete genome | blastn | 213424 | 1112 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Luteolibacter | Luteolibacter sp. AS25 | |
| 21967024 | 21967024 | PRJNA1146029_P_NODE_3478_length_458_cov_1.805195_g3200_i0 | PRJNA1146029 | 3478 | 458 | 1.805195 | 8.2677931 | uncultured Verrucomicrobiota bacterium | 156588 | Bacteria | Bacteria | 444 | 6.27e-120 | NTclustered | gi|226525339|gb|FJ872375.1| | 156588 | g3200 | i0 | 85.748 | 295.257641921397 | 428 | 51 | 93 | 10 | 35 | 458 | 28484 | 28063 | Uncultured Verrucomicrobia bacterium clone 286 genomic sequence | blastn | 135228 | 444 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | uncultured Verrucomicrobiota bacterium | |||||
| 24515901 | 24515901 | PRJNA1146029_P_NODE_12740_length_273_cov_1.540000_g12459_i0 | PRJNA1146029 | 12740 | 273 | 1.54 | 4.2042 | Luteolibacter sp. SL250 | 2995170 | Bacteria | Bacteria | 399 | 7.769999999999998e-107 | NTclustered | gi|2381117106|gb|CP113054.1| | 2995170 | g12459 | i0 | 93.04 | 1 | 273 | 19 | 100 | 0 | 1 | 273 | 1140881 | 1140609 | Luteolibacter sp. SL250 chromosome | blastn | 273 | 399 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Luteolibacter | Luteolibacter sp. SL250 | |
| 24516155 | 24516155 | PRJNA1146029_P_NODE_7460_length_328_cov_2.403922_g7181_i0 | PRJNA1146029 | 7460 | 328 | 2.403922 | 7.88486416 | Prosthecobacter dejongeii | 48465 | Bacteria | Bacteria | 545 | 1.1599999999999999e-150 | NTclustered | gi|183579826|emb|AM905423.1| | 48465 | g7181 | i0 | 96.646 | 245.737804878049 | 328 | 11 | 100 | 0 | 1 | 328 | 1440 | 1767 | Prosthecobacter dejongeii partial 23S rRNA gene, strain DSM12251 | blastn | 80602 | 545 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Prosthecobacter | Prosthecobacter dejongeii |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;