RNAquarium Metadata Server
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contig_metadata

11 rows where analysis = "blastn", bioproject = "PRJNA1146029" and tax_phylum = "Mollusca"

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tax_superkingdom 1

tax_phylum 1

  • Mollusca · 11 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1146029 · 11 ✖

analysis 1

  • blastn · 11 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2308971 2308971 PRJNA1146029_P_NODE_4082_length_424_cov_1.316239_g3804_i0 PRJNA1146029 4082 424 1.316239 5.58085336 Metazoa 33208 Mollusca Mollusca 100 1.44e-16   NTclustered gi|1207980031|ref|XM_021483861.1| 6573 g3804 i0 81.203 1.86792452830189 133 17 30 7 6 134 481 609 PREDICTED: Mizuhopecten yessoensis 40S ribosomal protein S5 (LOC110440710), mRNA blastn 792 100 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Pectinida Pectinidae Mizuhopecten Mizuhopecten yessoensis
2841108 2841108 PRJNA1146029_P_NODE_9663_length_293_cov_2.100000_g9382_i0 PRJNA1146029 9663 293 2.1 6.153 Haliotis rufescens 6454 Mollusca Mollusca 305 1.89e-78   NTclustered gi|2245706711|ref|XM_048385483.1| 6454 g9382 i0 88.492 81.8259385665529 252 29 86 0 1 252 290 39 PREDICTED: Haliotis rufescens tubulin beta chain-like (LOC124142795), transcript variant X3, mRNA blastn 23975 305 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Lepetellida Haliotidae Haliotis Haliotis rufescens
4861810 4861810 PRJNA1146029_P_NODE_9164_length_300_cov_2.022026_g8883_i0 PRJNA1146029 9164 300 2.022026 6.066078 Metazoa 33208 Mollusca Mollusca 183 9.479999999999998e-42   NTclustered gi|325297036|ref|NM_001204593.1| 6500 g8883 i0 80.498 57.0633333333333 241 46 80 1 2 242 29 268 Aplysia californica ribosomal protein L27a (LOC100533291), mRNA blastn 17119 183 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Aplysiida Aplysiidae Aplysia Aplysia californica
5393507 5393507 PRJNA1146029_P_NODE_9445_length_296_cov_2.417040_g9164_i0 PRJNA1146029 9445 296 2.41704 7.1544384 Littorina saxatilis 31220 Mollusca Mollusca 191 5.58e-44   NTclustered gi|2868622250|ref|XM_070342082.1| 31220 g9164 i0 79.11 3.16216216216216 292 49 97 10 1 286 3029 3314 PREDICTED: Littorina saxatilis myosin heavy chain, striated muscle-like (LOC138969316), mRNA blastn 936 191 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Littorinimorpha Littorinidae Littorina Littorina saxatilis
6668033 6668033 PRJNA1146029_P_NODE_20586_length_243_cov_4.123529_g20305_i0 PRJNA1146029 20586 243 4.1235290000000004 10.02017547 Bradybaena similaris 145626 Mollusca Mollusca 52.8 0.022   NTclustered gi|2912987826|dbj|AP039592.1| 145626 g20305 i0 100 0.11522633744856 28 0 12 0 215 242 66561567 66561540 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 11, sequence blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
6668139 6668139 PRJNA1146029_P_NODE_7306_length_331_cov_1.492248_g7028_i0 PRJNA1146029 7306 331 1.492248 4.93934088 Littorina saxatilis 31220 Mollusca Mollusca 265 3.68e-66   NTclustered gi|2868657593|ref|XM_070331548.1| 31220 g7028 i0 81.595 68.6102719033233 326 54 98 6 2 324 2515 2193 PREDICTED: Littorina saxatilis myosin heavy chain, striated muscle-like (LOC138959884), transcript variant X6, mRNA blastn 22710 265 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Littorinimorpha Littorinidae Littorina Littorina saxatilis
9218219 9218219 PRJNA1146029_P_NODE_4728_length_397_cov_4.805556_g4450_i0 PRJNA1146029 4728 397 4.805556 19.07805732 Littorina saxatilis 31220 Mollusca Mollusca 433 1.1599999999999999e-116   NTclustered gi|2868695775|ref|XM_070338800.1| 31220 g4450 i0 91.429 79.0654911838791 315 27 79 0 1 315 464 150 PREDICTED: Littorina saxatilis tubulin alpha-1A chain (LOC138966535), mRNA blastn 31389 433 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Littorinimorpha Littorinidae Littorina Littorina saxatilis
13043645 13043645 PRJNA1146029_P_NODE_10771_length_286_cov_1.154930_g10490_i0 PRJNA1146029 10771 286 1.15493 3.3030998 Octopus sinensis 2607531 Mollusca Mollusca 52.8 0.026   NTclustered gi|1914623226|ref|XM_029801219.2| 2607531 g10490 i0 100 0.195804195804196 28 0 10 0 39 66 1765 1792 PREDICTED: Octopus sinensis G kinase-anchoring protein 1 (LOC115231126), transcript variant X2, mRNA blastn 56 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Cephalopoda Octopoda Octopodidae Octopus Octopus sinensis
14319111 14319111 PRJNA1146029_P_NODE_4232_length_417_cov_1.186047_g3954_i0 PRJNA1146029 4232 417 1.186047 4.94581599 Aplysia californica 6500 Mollusca Mollusca 259 2.2e-64   NTclustered gi|1897933277|ref|XM_035971296.1| 6500 g3954 i0 79.028 78.9184652278177 391 72 93 10 1 386 3597 3212 PREDICTED: Aplysia californica myosin heavy chain, striated muscle (LOC101851430), mRNA blastn 32909 259 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Aplysiida Aplysiidae Aplysia Aplysia californica
19416078 19416078 PRJNA1146029_P_NODE_13036_length_271_cov_1.555556_g12755_i0 PRJNA1146029 13036 271 1.555556 4.21555676 Ylistrum balloti 509963 Mollusca Mollusca 52.8 0.025   NTclustered gi|2592064882|ref|XM_060212040.1| 509963 g12755 i0 100 0.103321033210332 28 0 10 0 15 42 4621 4594 PREDICTED: Ylistrum balloti protein CDV3 homolog (LOC132548218), mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Pectinida Pectinidae Ylistrum Ylistrum balloti
20691686 20691686 PRJNA1146029_P_NODE_22617_length_226_cov_2.013072_g22335_i0 PRJNA1146029 22617 226 2.013072 4.54954272 Aplysia californica 6500 Mollusca Mollusca 176 1.14e-39   NTclustered gi|1897922439|ref|XM_013081821.2| 6500 g22335 i0 82.126 12.8628318584071 207 35 91 2 1 206 1208 1003 PREDICTED: Aplysia californica catalase (LOC101860167), mRNA blastn 2907 176 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Aplysiida Aplysiidae Aplysia Aplysia californica

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;