RNAquarium Metadata Server
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contig_metadata

1 row where analysis = "blastn", bioproject = "PRJNA1146029" and tax_phylum = "Cryptomycota"

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tax_superkingdom 1

tax_phylum 1

  • Cryptomycota · 1 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1146029 · 1 ✖

analysis 1

  • blastn · 1 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9218036 9218036 PRJNA1146029_P_NODE_1448_length_737_cov_3.212349_g1199_i0 PRJNA1146029 1448 737 3.212349 23.67501213 uncultured Cryptomycota 1130064 Fungi Fungi 150 2.5399999999999996e-31   NTclustered gi|387155805|emb|HE806178.1| 1130064 g1199 i0 89.167 17.5088195386703 120 13 16 0 148 267 1326 1445 Uncultured Cryptomycota partial 26S rRNA gene, clone Bcomple7 blastn 12904 150 1 Eukaryota Opisthokonta Fungi Cryptomycota         uncultured Cryptomycota

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;