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contig_metadata

11 rows where analysis = "blastn", bioproject = "PRJNA1146029" and tax_phylum = "Cercozoa"

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tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 11 ✖

tax_clade 1

bioproject 1

  • PRJNA1146029 · 11 ✖

analysis 1

  • blastn · 11 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
290107 290107 PRJNA1146029_P_NODE_19581_length_245_cov_0.895349_g19300_i0 PRJNA1146029 19581 245 0.895349 2.19360505 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 453 5.1900000000000006e-123   NTclustered gi|238617602|gb|FJ973377.1| 188950 g19300 i0 100 89.3632653061224 245 0 100 0 1 245 330 86 Bodomorpha minima strain ATCC 50339 28S ribosomal RNA gene, partial sequence blastn 21894 453 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
2308994 2308994 PRJNA1146029_P_NODE_9302_length_298_cov_2.737778_g9021_i0 PRJNA1146029 9302 298 2.737778 8.15857844 Bodomorpha 188949 SAR_Eukaryotes SAR_Eukaryotes 551 2.239999999999999e-152   NTclustered gi|33309639|gb|AF411276.1| 188950 g9021 i0 100 85.010067114094 298 0 100 0 1 298 1002 705 Bodomorpha minima 18S ribosomal RNA gene, complete sequence blastn 25333 551 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
6668077 6668077 PRJNA1146029_P_NODE_2946_length_498_cov_2.552941_g2669_i0 PRJNA1146029 2946 498 2.552941 12.71364618 Verrucomonas longifila 629764 SAR_Eukaryotes SAR_Eukaryotes 165 5.99e-36   NTclustered gi|290760489|gb|GQ144692.1| 629764 g2669 i0 86.275 30.1044176706827 153 19 31 2 344 496 1245 1395 Cercozoa sp. CC-2009f large subunit ribosomal RNA gene, partial sequence blastn 14992 165 1 Eukaryota Sar   Cercozoa Thecofilosea Ventricleftida   Verrucomonas Verrucomonas longifila
11236939 11236939 PRJNA1146029_P_NODE_8349_length_313_cov_1.604167_g8068_i0 PRJNA1146029 8349 313 1.604167 5.02104271 Guttulinopsis 1144921 SAR_Eukaryotes SAR_Eukaryotes 566 8.459999999999999e-157   NTclustered gi|1402550487|gb|MH488773.1| 2231167 g8068 i0 99.361 16.7444089456869 313 1 100 1 1 313 323 634 Guttulinopsis sp. isolate STA small subunit ribosomal RNA gene, partial sequence blastn 5241 571 0.991243432574431 Eukaryota Sar   Cercozoa     Guttulinopsidae Guttulinopsis Guttulinopsis sp.
13043928 13043928 PRJNA1146029_P_NODE_8011_length_318_cov_2.579592_g7732_i0 PRJNA1146029 8011 318 2.579592 8.20310256 Rosculus incognitus 2231162 SAR_Eukaryotes SAR_Eukaryotes 361 4.36e-95   NTclustered gi|1402550483|gb|MH488769.1| 2231162 g7732 i0 93.443 21.1289308176101 244 15 77 1 59 302 1193 951 Rosculus incognitus isolate ATCC 50577 small subunit ribosomal RNA gene and internal transcribed spacer 1, partial sequence blastn 6719 361 1 Eukaryota Sar   Cercozoa     Guttulinopsidae Rosculus Rosculus incognitus
13786991 13786991 PRJNA1146029_P_NODE_21191_length_242_cov_2.733728_g20910_i0 PRJNA1146029 21191 242 2.733728 6.61562176 Guttulinopsidae 2602012 SAR_Eukaryotes SAR_Eukaryotes 285 1.97e-72   NTclustered gi|1002343693|gb|KU738571.1| 1144922 g20910 i0 88.066 57.6363636363636 243 25 100 3 1 242 1686 1925 Guttulinopsis vulgaris isolate JDS-Ark 18S ribosomal RNA gene, partial sequence blastn 13948 285 1 Eukaryota Sar   Cercozoa     Guttulinopsidae Guttulinopsis Guttulinopsis vulgaris
15593070 15593070 PRJNA1146029_P_NODE_3273_length_473_cov_1.222500_g2996_i0 PRJNA1146029 3273 473 1.2225 5.782425 Cercomonas sp. 1979794 SAR_Eukaryotes SAR_Eukaryotes 795 0   NTclustered gi|2651357801|gb|PP174314.1| 1979794 g2996 i0 97.04 100.729386892178 473 12 100 2 1 473 4168 3698 Cercomonas sp. isolate P5 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 47645 795 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Cercomonas Cercomonas sp.
18141768 18141768 PRJNA1146029_P_NODE_15395_length_254_cov_2.303867_g15114_i0 PRJNA1146029 15395 254 2.303867 5.85182218 Esquamula lacrimiformis 1176540 SAR_Eukaryotes SAR_Eukaryotes 289 1.61e-73   NTclustered gi|409971369|dbj|AB714271.1| 1176540 g15114 i0 96.571 82.7125984251968 175 4 68 2 82 254 3838 3664 Esquamula lacrimiformis gene for 28S ribosomal RNA, partial sequence blastn 21009 289 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida   Esquamula Esquamula lacrimiformis
18141943 18141943 PRJNA1146029_P_NODE_5515_length_372_cov_1.030100_g5237_i0 PRJNA1146029 5515 372 1.0301 3.831972 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 682 0   NTclustered gi|302026154|gb|GQ377660.1| 188950 g5237 i0 99.731 92.4059139784946 372 1 100 0 1 372 864 493 Bodomorpha minima beta-tubulin (Btub) gene, partial cds blastn 34375 682 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
20691679 20691679 PRJNA1146029_P_NODE_22277_length_241_cov_0.916667_g21996_i0 PRJNA1146029 22277 241 0.916667 2.20916747 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 231 2.6e-56   NTclustered gi|238617666|gb|FJ973412.1| 188950 g21996 i0 99.219 20.0290456431535 128 1 53 0 114 241 1 128 Bodomorpha minima strain ATCC 50339 alpha-tubulin (atub) gene, partial cds blastn 4827 231 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
24516172 24516172 PRJNA1146029_P_NODE_8320_length_314_cov_0.958506_g8039_i0 PRJNA1146029 8320 314 0.958506 3.00970884 Guttulinopsis rogosa 2231170 SAR_Eukaryotes SAR_Eukaryotes 580 3.0299999999999992e-161   NTclustered gi|1402550486|gb|MH488772.1| 2231170 g8039 i0 100 50.468152866242 314 0 100 0 1 314 1514 1201 Guttulinopsis rogosa isolate T1 small subunit ribosomal RNA gene, partial sequence blastn 15847 580 1 Eukaryota Sar   Cercozoa     Guttulinopsidae Guttulinopsis Guttulinopsis rogosa

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;