contig_metadata
18 rows where analysis = "blastn", bioproject = "PRJNA1146029" and tax_phylum = "Bdellovibrionota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 290191 | 290191 | PRJNA1146029_P_NODE_4381_length_411_cov_2.449704_g4103_i0 | PRJNA1146029 | 4381 | 411 | 2.449704 | 10.06828344 | Bdellovibrio sp. qaytius | 1916293 | Bacteria | Bacteria | 472 | 2.5599999999999997e-128 | NTclustered | gi|1552089877|gb|CP025734.1| | 1916293 | g4103 | i0 | 87.591 | 200.420924574209 | 411 | 46 | 100 | 3 | 1 | 411 | 666392 | 666797 | Bdellovibrio sp. qaytius chromosome, complete genome | blastn | 82373 | 472 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. qaytius | ||
| 2840989 | 2840989 | PRJNA1146029_P_NODE_2923_length_500_cov_3.608899_g2646_i0 | PRJNA1146029 | 2923 | 500 | 3.608899 | 18.044495 | Bdellovibrio bacteriovorus | 959 | Bacteria | Bacteria | 896 | 0 | NTclustered | gi|2800924434|gb|CP168967.1| | 959 | g2646 | i0 | 99 | 176.804 | 500 | 5 | 100 | 0 | 1 | 500 | 784205 | 783706 | Bdellovibrio bacteriovorus strain Bd4 chromosome, complete genome | blastn | 88402 | 896 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio bacteriovorus | ||
| 2841081 | 2841081 | PRJNA1146029_P_NODE_8423_length_312_cov_1.464435_g8142_i0 | PRJNA1146029 | 8423 | 312 | 1.464435 | 4.5690372 | Pseudobdellovibrionaceae bacterium | 2026715 | Bacteria | Bacteria | 377 | 4.24e-100 | NTclustered | gi|2258818259|gb|CP060220.1| | 2026715 | g8142 | i0 | 88.498 | 427.221153846154 | 313 | 35 | 100 | 1 | 1 | 312 | 3252068 | 3252380 | MAG: Pseudobdellovibrionaceae bacterium isolate HK-STAS-BDEL-7 chromosome | blastn | 133293 | 377 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Pseudobdellovibrionaceae bacterium | |||
| 4117186 | 4117186 | PRJNA1146029_P_NODE_2964_length_497_cov_1.250000_g2687_i0 | PRJNA1146029 | 2964 | 497 | 1.25 | 6.2125 | Pseudobdellovibrionaceae bacterium | 2026715 | Bacteria | Bacteria | 566 | 1.4e-156 | NTclustered | gi|2258818259|gb|CP060220.1| | 2026715 | g2687 | i0 | 87.302 | 160.971830985915 | 504 | 53 | 99 | 9 | 1 | 496 | 3250598 | 3251098 | MAG: Pseudobdellovibrionaceae bacterium isolate HK-STAS-BDEL-7 chromosome | blastn | 80003 | 566 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Pseudobdellovibrionaceae bacterium | |||
| 5393290 | 5393290 | PRJNA1146029_P_NODE_16305_length_251_cov_0.865169_g16024_i0 | PRJNA1146029 | 16305 | 251 | 0.865169 | 2.17157419 | uncultured Micavibrio sp. | 362447 | Bacteria | Bacteria | 322 | 1.57e-83 | NTclustered | gi|2621703983|emb|OY762938.1| | 362447 | g16024 | i0 | 90.361 | 182.581673306773 | 249 | 19 | 98 | 4 | 2 | 247 | 961650 | 961896 | MAG: uncultured Micavibrio sp. isolate 194a20bb-105a-45c9-9846-0688499aae06 genome assembly, chromosome: 1 | blastn | 45828 | 322 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Micavibrio | uncultured Micavibrio sp. | ||
| 7411509 | 7411509 | PRJNA1146029_P_NODE_166_length_1852_cov_6.381113_g112_i0 | PRJNA1146029 | 166 | 1852 | 6.381113 | 118.17821276 | Peredibacter | 263370 | Bacteria | Bacteria | 3079 | 0 | NTclustered | gi|2631252187|gb|CP139487.1| | 28202 | g112 | i0 | 96.656 | 146.563714902808 | 1854 | 60 | 100 | 1 | 1 | 1852 | 510709 | 512562 | Peredibacter starrii strain A3.12 chromosome, complete genome | blastn | 271436 | 3079 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Peredibacter | Peredibacter starrii | ||
| 9218175 | 9218175 | PRJNA1146029_P_NODE_22368_length_239_cov_2.493976_g22087_i0 | PRJNA1146029 | 22368 | 239 | 2.493976 | 5.96060264 | Bdellovibrio sp. HCB274 | 3394361 | Bacteria | Bacteria | 228 | 3.329999999999999e-55 | NTclustered | gi|2895984058|gb|CP178623.1| | 3394361 | g22087 | i0 | 86.512 | 191.075313807531 | 215 | 20 | 89 | 6 | 1 | 213 | 1742346 | 1742553 | Bdellovibrio sp. HCB274 chromosome, complete genome | blastn | 45667 | 228 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. HCB274 | ||
| 11768857 | 11768857 | PRJNA1146029_P_NODE_3890_length_433_cov_2.988889_g3612_i0 | PRJNA1146029 | 3890 | 433 | 2.988889 | 12.94188937 | Peredibacter sp. HCB2-198 | 3383025 | Bacteria | Bacteria | 617 | 3.29e-172 | NTclustered | gi|2867657404|gb|CP174607.1| | 3383025 | g3612 | i0 | 92.379 | 131.699769053118 | 433 | 33 | 100 | 0 | 1 | 433 | 1292313 | 1292745 | Peredibacter sp. HCB2-198 chromosome, complete genome | blastn | 57026 | 617 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Peredibacter | Peredibacter sp. HCB2-198 | ||
| 13043822 | 13043822 | PRJNA1146029_P_NODE_21591_length_242_cov_0.911243_g21310_i0 | PRJNA1146029 | 21591 | 242 | 0.911243 | 2.20520806 | Pseudobdellovibrionaceae bacterium | 2026715 | Bacteria | Bacteria | 244 | 3.3499999999999997e-60 | NTclustered | gi|2258818259|gb|CP060220.1| | 2026715 | g21310 | i0 | 85.95 | 164.297520661157 | 242 | 19 | 94 | 8 | 15 | 242 | 3251640 | 3251880 | MAG: Pseudobdellovibrionaceae bacterium isolate HK-STAS-BDEL-7 chromosome | blastn | 39760 | 244 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Pseudobdellovibrionaceae bacterium | |||
| 14318995 | 14318995 | PRJNA1146029_P_NODE_172_length_1820_cov_5.283343_g112_i1 | PRJNA1146029 | 172 | 1820 | 5.283343 | 96.1568426 | Peredibacter starrii | 28202 | Bacteria | Bacteria | 3068 | 0 | NTclustered | gi|2631252187|gb|CP139487.1| | 28202 | g112 | i1 | 97.091 | 146.895604395604 | 1822 | 50 | 100 | 2 | 1 | 1820 | 510709 | 512529 | Peredibacter starrii strain A3.12 chromosome, complete genome | blastn | 267350 | 3068 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Peredibacter | Peredibacter starrii | ||
| 15061389 | 15061389 | PRJNA1146029_P_NODE_2292_length_569_cov_1.786290_g2017_i0 | PRJNA1146029 | 2292 | 569 | 1.78629 | 10.1639901 | Bdellovibrio | 958 | Bacteria | Bacteria | 966 | 0 | NTclustered | gi|485099167|ref|NR_102561.1| | 959 | g2017 | i0 | 97.364 | 90.0017574692443 | 569 | 14 | 100 | 1 | 1 | 569 | 1699 | 1132 | Bdellovibrio bacteriovorus strain Tiberius 23S ribosomal RNA gene, complete sequence | blastn | 51211 | 972 | 0.993827160493827 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio bacteriovorus | ||
| 15592930 | 15592930 | PRJNA1146029_P_NODE_14653_length_260_cov_1.395722_g14372_i0 | PRJNA1146029 | 14653 | 260 | 1.395722 | 3.6288772 | Bdellovibrio reynosensis | 2835041 | Bacteria | Bacteria | 150 | 8.17e-32 | NTclustered | gi|2216477995|gb|CP093442.1| | 2835041 | g14372 | i0 | 77.395 | 1.00384615384615 | 261 | 53 | 99 | 6 | 3 | 260 | 2709317 | 2709574 | Bdellovibrio reynosensis strain LBG001 chromosome, complete genome | blastn | 261 | 150 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio reynosensis | ||
| 15593155 | 15593155 | PRJNA1146029_P_NODE_8513_length_311_cov_0.970588_g8232_i0 | PRJNA1146029 | 8513 | 311 | 0.970588 | 3.01852868 | Fluviispira sanaruensis | 2493639 | Bacteria | Bacteria | 309 | 1.5600000000000002e-79 | NTclustered | gi|1566193515|dbj|AP019368.1| | 2493639 | g8232 | i0 | 84.762 | 143.659163987138 | 315 | 40 | 100 | 6 | 1 | 311 | 399337 | 399647 | Silvanigrellales bacterium RF1110005 DNA, complete genome | blastn | 44678 | 309 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Oligoflexia | Silvanigrellales | Silvanigrellaceae | Fluviispira | Fluviispira sanaruensis | ||
| 16867155 | 16867155 | PRJNA1146029_P_NODE_14554_length_261_cov_1.170213_g14273_i0 | PRJNA1146029 | 14554 | 261 | 1.170213 | 3.05425593 | Bdellovibrio sp. HCB337 | 3394358 | Bacteria | Bacteria | 427 | 3.38e-115 | NTclustered | gi|2895525383|gb|CP178621.1| | 3394358 | g14273 | i0 | 96.169 | 178.647509578544 | 261 | 10 | 100 | 0 | 1 | 261 | 3447625 | 3447365 | Bdellovibrio sp. HCB337 chromosome, complete genome | blastn | 46627 | 427 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. HCB337 | ||
| 17611329 | 17611329 | PRJNA1146029_P_NODE_4774_length_396_cov_1.043344_g4496_i0 | PRJNA1146029 | 4774 | 396 | 1.043344 | 4.13164224 | Bacteriovorax | 146784 | Bacteria | Bacteria | 643 | 4.919999999999999e-180 | NTclustered | gi|1700689994|gb|CP030035.1| | 960 | g4496 | i0 | 95.96 | 225.924242424242 | 396 | 16 | 100 | 0 | 1 | 396 | 1661828 | 1661433 | Bacteriovorax stolpii strain AC01 chromosome, complete genome | blastn | 89466 | 643 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Bacteriovorax | Bacteriovorax stolpii | ||
| 21966951 | 21966951 | PRJNA1146029_P_NODE_18638_length_247_cov_0.885057_g18357_i0 | PRJNA1146029 | 18638 | 247 | 0.885057 | 2.18609079 | Bdellovibrio sp. HCB288 | 3394355 | Bacteria | Bacteria | 257 | 4.41e-64 | NTclustered | gi|2895994964|gb|CP178619.1| | 3394355 | g18357 | i0 | 85.484 | 52.497975708502 | 248 | 34 | 100 | 2 | 1 | 247 | 2063257 | 2063011 | Bdellovibrio sp. HCB288 chromosome, complete genome | blastn | 12967 | 257 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. HCB288 | ||
| 21967109 | 21967109 | PRJNA1146029_P_NODE_8678_length_309_cov_1.076271_g8397_i0 | PRJNA1146029 | 8678 | 309 | 1.076271 | 3.32567739 | uncultured Bdellovibrio sp. | 239744 | Bacteria | Bacteria | 571 | 1.7899999999999995e-158 | NTclustered | gi|333034728|gb|JF703522.1| | 239744 | g8397 | i0 | 100 | 128.122977346278 | 309 | 0 | 100 | 0 | 1 | 309 | 313 | 5 | Uncultured Bdellovibrio sp. clone L1-86 16S ribosomal RNA gene, partial sequence | blastn | 39590 | 571 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | uncultured Bdellovibrio sp. | ||
| 23242519 | 23242519 | PRJNA1146029_P_NODE_20959_length_243_cov_0.905882_g20678_i0 | PRJNA1146029 | 20959 | 243 | 0.905882 | 2.20129326 | Pseudobdellovibrio sp. HCB154 | 3386277 | Bacteria | Bacteria | 60.2 | 1.31e-4 | NTclustered | gi|2872995934|gb|CP176530.1| | 3386277 | g20678 | i0 | 94.737 | 1.75720164609054 | 38 | 2 | 16 | 0 | 206 | 243 | 61868 | 61831 | Pseudobdellovibrio sp. HCB154 chromosome, complete genome | blastn | 427 | 60.2 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Pseudobdellovibrio | Pseudobdellovibrio sp. HCB154 |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;