RNAquarium Metadata Server
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contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJNA1146029" and tax_phylum = "Basidiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Basidiomycota · 8 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1146029 · 8 ✖

analysis 1

  • blastn · 8 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2840992 2840992 PRJNA1146029_P_NODE_3243_length_475_cov_2.641791_g2966_i0 PRJNA1146029 3243 475 2.641791 12.54850725 Malassezia restricta 76775 Fungi Fungi 878 0   NTclustered gi|1546635598|ref|XR_003525370.1| 76775 g2966 i0 100 106.513684210526 475 0 100 0 1 475 1943 1469 Malassezia restricta 28S ribosomal RNA (MRET_r0004), rRNA blastn 50594 878 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
3584078 3584078 PRJNA1146029_P_NODE_13143_length_270_cov_2.619289_g12862_i0 PRJNA1146029 13143 270 2.619289 7.0720803 Opisthokonta 33154 Fungi Fungi 499 7.349999999999998e-137   NTclustered gi|126508724|gb|EF397600.1| 81056 g12862 i0 100 106.003703703704 270 0 100 0 1 270 2464 2733 Poria cocos strain KANP No. 7233 28S ribosomal RNA gene, partial sequence blastn 28621 499 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Polyporales Phaeolaceae Wolfiporia Wolfiporia cocos
4117128 4117128 PRJNA1146029_P_NODE_19484_length_245_cov_1.656977_g19203_i0 PRJNA1146029 19484 245 1.656977 4.05959365 Malassezia restricta 76775 Fungi Fungi 448 2.41e-121   NTclustered gi|1546631449|ref|XM_027627385.1| 76775 g19203 i0 99.592 2.89387755102041 245 1 100 0 1 245 3247 3491 Malassezia restricta phosphoribosylformylglycinamidine synthase (MRET_0758), partial mRNA blastn 709 448 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
5393371 5393371 PRJNA1146029_P_NODE_20685_length_243_cov_1.358824_g20404_i0 PRJNA1146029 20685 243 1.358824 3.30194232 Kwoniella dendrophila 4975 Fungi Fungi 228 3.389999999999999e-55   NTclustered gi|2752973927|ref|XM_066215864.1| 1295534 g20404 i0 83.74 16.4814814814815 246 34 100 4 1 243 413 171 Kwoniella dendrophila CBS 6074 histone H3 (L201_000057), partial mRNA blastn 4005 228 1 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Tremellales Cryptococcaceae Kwoniella Kwoniella dendrophila
6136492 6136492 PRJNA1146029_P_NODE_2465_length_545_cov_3.925847_g2190_i0 PRJNA1146029 2465 545 3.925847 21.39586615 Opisthokonta 33154 Fungi Fungi 579 1.9899999999999998e-160   NTclustered gi|915512607|gb|KP825390.1| 76775 g2190 i0 100 92.9302752293578 313 0 84 0 1 313 519 207 Malassezia restricta strain ISOSEB19F 28S ribosomal RNA gene, partial sequence blastn 50647 579 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
13786964 13786964 PRJNA1146029_P_NODE_15531_length_253_cov_1.711111_g15250_i0 PRJNA1146029 15531 253 1.711111 4.32911083 Malassezia 55193 Fungi Fungi 468 1.92e-127   NTclustered gi|1321659621|gb|KY911094.1| 76775 g15250 i0 100 49.4743083003953 253 0 100 0 1 253 1689 1437 Malassezia restricta mitochondrion, complete genome blastn 12517 468 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
21966909 21966909 PRJNA1146029_P_NODE_16018_length_251_cov_0.865169_g15737_i0 PRJNA1146029 16018 251 0.865169 2.17157419 Vanrija pseudolonga 143232 Fungi Fungi 93.5 1.34e-14   NTclustered gi|2669736644|ref|XM_062770045.1| 143232 g15737 i0 94.915 1.0597609561753 59 3 24 0 1 59 477 535 Vanrija pseudolonga putative transporter (SPCC417.10_7), partial mRNA blastn 266 93.5 1 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Trichosporonales Trichosporonaceae Vanrija Vanrija pseudolonga
23242396 23242396 PRJNA1146029_P_NODE_13719_length_266_cov_3.834197_g13438_i0 PRJNA1146029 13719 266 3.834197 10.19896402 Malassezia restricta 76775 Fungi Fungi 479 9.42e-131   NTclustered gi|1546635598|ref|XR_003525370.1| 76775 g13438 i0 99.245 89.6353383458647 265 2 99 0 2 266 3241 2977 Malassezia restricta 28S ribosomal RNA (MRET_r0004), rRNA blastn 23843 479 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;