contig_metadata
53 rows where analysis = "blastn", bioproject = "PRJNA1145574" and tax_phylum = "Pseudomonadota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 288624 | 288624 | PRJNA1145574_P_NODE_11541_length_252_cov_0.871508_g11357_i0 | PRJNA1145574 | 11541 | 252 | 0.871508 | 2.19620016 | Duganella zoogloeoides | 75659 | Bacteria | Bacteria | 178 | 3.61e-40 | NTclustered | gi|2637106083|gb|CP140152.1| | 75659 | g11357 | i0 | 82.673 | 67.9365079365079 | 202 | 33 | 80 | 2 | 52 | 252 | 4701279 | 4701479 | Duganella zoogloeoides strain ATCC 25935 chromosome, complete genome | blastn | 17120 | 178 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Duganella | Duganella zoogloeoides | ||
| 288641 | 288641 | PRJNA1145574_P_NODE_12221_length_250_cov_0.881356_g12037_i0 | PRJNA1145574 | 12221 | 250 | 0.881356 | 2.20339 | Paracoccus sp. SCSIO 75233 | 3017782 | Bacteria | Bacteria | 385 | 1.97e-102 | NTclustered | gi|2428702884|gb|CP115757.1| | 3017782 | g12037 | i0 | 94.422 | 182.908 | 251 | 12 | 100 | 2 | 1 | 250 | 2353270 | 2353519 | Paracoccus sp. SCSIO 75233 chromosome, complete genome | blastn | 45727 | 385 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Rhodobacterales | Paracoccaceae | Paracoccus | Paracoccus sp. SCSIO 75233 | ||
| 1563279 | 1563279 | PRJNA1145574_P_NODE_11522_length_252_cov_0.871508_g11338_i0 | PRJNA1145574 | 11522 | 252 | 0.871508 | 2.19620016 | Betaproteobacteria bacterium GR16-43 | 1904640 | Bacteria | Bacteria | 187 | 6e-43 | NTclustered | gi|1132406254|gb|CP019169.1| | 1904640 | g11338 | i0 | 81.466 | 17.3611111111111 | 232 | 39 | 91 | 4 | 3 | 232 | 3606720 | 3606491 | Betaproteobacteria bacterium GR16-43, complete genome | blastn | 4375 | 187 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Betaproteobacteria bacterium GR16-43 | |||||
| 2308569 | 2308569 | PRJNA1145574_P_NODE_11202_length_253_cov_0.866667_g11018_i0 | PRJNA1145574 | 11202 | 253 | 0.866667 | 2.19266751 | Escherichia | 561 | Bacteria | Bacteria | 468 | 1.92e-127 | NTclustered | gi|2023981091|gb|CP072662.1| | 562 | g11018 | i0 | 100 | 100 | 253 | 0 | 100 | 0 | 1 | 253 | 1191698 | 1191446 | Escherichia coli strain BW25113 frmA KO chromosome | blastn | 25300 | 468 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 2308572 | 2308572 | PRJNA1145574_P_NODE_11442_length_252_cov_0.871508_g11258_i0 | PRJNA1145574 | 11442 | 252 | 0.871508 | 2.19620016 | Escherichia | 561 | Bacteria | Bacteria | 466 | 6.89e-127 | NTclustered | gi|2650988455|gb|CP142548.1| | 562 | g11258 | i0 | 100 | 100 | 252 | 0 | 100 | 0 | 1 | 252 | 629661 | 629912 | Escherichia coli strain ExPEC_A382 chromosome, complete genome | blastn | 25200 | 466 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 2839453 | 2839453 | PRJNA1145574_P_NODE_11283_length_252_cov_0.871508_g11099_i0 | PRJNA1145574 | 11283 | 252 | 0.871508 | 2.19620016 | Candidatus Fonsibacter ubiquis | 1925548 | Bacteria | Bacteria | 455 | 1.49e-123 | NTclustered | gi|1269271235|gb|CP024034.1| | 1925548 | g11099 | i0 | 99.206 | 15.1190476190476 | 252 | 2 | 100 | 0 | 1 | 252 | 292937 | 292686 | Candidatus Fonsibacter ubiquis isolate LSUCC0530 chromosome, complete genome | blastn | 3810 | 455 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Candidatus Pelagibacterales | Candidatus Fonsibacter | Candidatus Fonsibacter ubiquis | |||
| 3583741 | 3583741 | PRJNA1145574_P_NODE_14823_length_242_cov_0.923077_g14639_i0 | PRJNA1145574 | 14823 | 242 | 0.923077 | 2.23384634 | Escherichia | 561 | Bacteria | Bacteria | 448 | 2.3799999999999995e-121 | NTclustered | gi|2852407896|emb|OZ038830.1| | 562 | g14639 | i0 | 100 | 99.297520661157 | 242 | 0 | 100 | 0 | 1 | 242 | 4891268 | 4891509 | Escherichia coli isolate 30348_2#51 genome assembly, chromosome: 1 | blastn | 24030 | 448 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 4861394 | 4861394 | PRJNA1145574_P_NODE_9104_length_285_cov_1.150943_g8920_i0 | PRJNA1145574 | 9104 | 285 | 1.150943 | 3.28018755 | Delftia | 80865 | Bacteria | Bacteria | 499 | 7.82e-137 | NTclustered | gi|1249984824|gb|CP022656.1| | 80866 | g8920 | i0 | 100 | 81.7508771929825 | 270 | 0 | 95 | 0 | 1 | 270 | 1248665 | 1248934 | Delftia acidovorans strain RAY209 genome | blastn | 23299 | 499 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Delftia | Delftia acidovorans | ||
| 6136109 | 6136109 | PRJNA1145574_P_NODE_10485_length_260_cov_3.256684_g10301_i0 | PRJNA1145574 | 10485 | 260 | 3.256684 | 8.4673784 | root | 1 | Root_unresolved | Root_unresolved | 442 | 1.1999999999999999e-119 | NTclustered | gi|2160204256|gb|CP088081.1| | 36863 | g10301 | i0 | 97.308 | 152.080769230769 | 260 | 7 | 100 | 0 | 1 | 260 | 589522 | 589781 | Ideonella dechloratans strain CCUG 30977 chromosome, complete genome | blastn | 39541 | 442 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Sphaerotilaceae | Ideonella | Ideonella dechloratans | ||
| 6136134 | 6136134 | PRJNA1145574_P_NODE_3265_length_451_cov_3.716931_g3081_i0 | PRJNA1145574 | 3265 | 451 | 3.716931 | 16.76335881 | Sphaerotilaceae | 2975441 | Bacteria | Bacteria | 656 | 0 | NTclustered | gi|121281912|gb|EF157669.1| | 417305 | g3081 | i0 | 92.905 | 254.037694013304 | 451 | 32 | 100 | 0 | 1 | 451 | 13503 | 13953 | Uncultured beta proteobacterium CBNPD1 BAC clone 578 genomic sequence | blastn | 114571 | 656 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | uncultured beta proteobacterium CBNPD1 BAC clone 578 | |||||
| 6136135 | 6136135 | PRJNA1145574_P_NODE_3305_length_449_cov_26.611702_g3121_i0 | PRJNA1145574 | 3305 | 449 | 26.611702 | 119.48654198 | Aeromonas | 642 | Bacteria | Bacteria | 62.1 | 7.23e-5 | NTclustered | gi|2830880323|gb|CP170761.1| | 196024 | g3121 | i0 | 97.222 | 0.298440979955457 | 36 | 1 | 9 | 0 | 215 | 250 | 1308400 | 1308365 | Aeromonas dhakensis strain CWH5 chromosome, complete genome | blastn | 134 | 62.1 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Aeromonadales | Aeromonadaceae | Aeromonas | Aeromonas dhakensis | ||
| 7411203 | 7411203 | PRJNA1145574_P_NODE_9846_length_272_cov_1.341709_g9662_i0 | PRJNA1145574 | 9846 | 272 | 1.341709 | 3.64944848 | Delftia | 80865 | Bacteria | Bacteria | 464 | 2.7099999999999998e-126 | NTclustered | gi|1134452940|gb|CP019171.1| | 80866 | g9662 | i0 | 98.12 | 30.2794117647059 | 266 | 5 | 98 | 0 | 1 | 266 | 1129361 | 1129096 | Delftia acidovorans isolate ANG1, complete genome | blastn | 8236 | 464 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Delftia | Delftia acidovorans | ||
| 8686393 | 8686393 | PRJNA1145574_P_NODE_13507_length_246_cov_0.901734_g13323_i0 | PRJNA1145574 | 13507 | 246 | 0.901734 | 2.21826564 | Ectopseudomonas | 3236654 | Bacteria | Bacteria | 394 | 3.2e-105 | NTclustered | gi|2798691846|gb|CP166923.2| | 301 | g13323 | i0 | 95.528 | 141.577235772358 | 246 | 11 | 100 | 0 | 1 | 246 | 384948 | 385193 | Ectopseudomonas oleovorans strain ERA chromosome, complete genome | blastn | 34828 | 394 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Ectopseudomonas | Ectopseudomonas oleovorans | ||
| 8686417 | 8686417 | PRJNA1145574_P_NODE_4547_length_392_cov_2.068966_g4363_i0 | PRJNA1145574 | 4547 | 392 | 2.068966 | 8.11034672 | Pseudomonadota | 1224 | Bacteria | Bacteria | 725 | 0 | NTclustered | gi|2051600372|gb|MW595342.1| | 287 | g4363 | i0 | 100 | 117.09693877551 | 392 | 0 | 100 | 0 | 1 | 392 | 875 | 484 | Pseudomonas aeruginosa strain NMI2960/12 In2021 integron, complete sequence | blastn | 45902 | 725 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas aeruginosa | ||
| 9961398 | 9961398 | PRJNA1145574_P_NODE_10128_length_267_cov_1.608247_g9944_i0 | PRJNA1145574 | 10128 | 267 | 1.608247 | 4.29401949 | Pseudomonas | 286 | Bacteria | Bacteria | 460 | 3.4299999999999996e-125 | NTclustered | gi|1101508184|gb|CP017964.1| | 380021 | g9944 | i0 | 97.753 | 99.9662921348315 | 267 | 6 | 100 | 0 | 1 | 267 | 3889275 | 3889009 | Pseudomonas protegens strain UCT chromosome | blastn | 26691 | 460 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas protegens | ||
| 9961409 | 9961409 | PRJNA1145574_P_NODE_11368_length_252_cov_0.871508_g11184_i0 | PRJNA1145574 | 11368 | 252 | 0.871508 | 2.19620016 | Escherichia | 561 | Bacteria | Bacteria | 466 | 6.89e-127 | NTclustered | gi|2507144281|gb|CP122454.1| | 562 | g11184 | i0 | 100 | 100 | 252 | 0 | 100 | 0 | 1 | 252 | 1797235 | 1797486 | Escherichia coli strain 82.0311 chromosome, complete genome | blastn | 25200 | 466 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 9961421 | 9961421 | PRJNA1145574_P_NODE_13608_length_246_cov_0.901734_g13424_i0 | PRJNA1145574 | 13608 | 246 | 0.901734 | 2.21826564 | Escherichia | 561 | Bacteria | Bacteria | 449 | 6.74e-122 | NTclustered | gi|2249812848|gb|CP098223.1| | 562 | g13424 | i0 | 99.593 | 100 | 246 | 1 | 100 | 0 | 1 | 246 | 3757067 | 3756822 | Escherichia coli strain Z0117EC0005 chromosome, complete genome | blastn | 24600 | 449 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 11236540 | 11236540 | PRJNA1145574_P_NODE_10129_length_267_cov_1.603093_g9945_i0 | PRJNA1145574 | 10129 | 267 | 1.603093 | 4.28025831 | Bradyrhizobium | 374 | Bacteria | Bacteria | 285 | 2.21e-72 | NTclustered | gi|2159853310|gb|CP088014.1| | 993502 | g9945 | i0 | 97.041 | 96.059925093633 | 169 | 5 | 63 | 0 | 97 | 265 | 5983370 | 5983202 | Bradyrhizobium daqingense strain CCBAU 15774 chromosome, complete genome | blastn | 25648 | 285 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Nitrobacteraceae | Bradyrhizobium | Bradyrhizobium daqingense | ||
| 11236602 | 11236602 | PRJNA1145574_P_NODE_9909_length_271_cov_1.237374_g9725_i0 | PRJNA1145574 | 9909 | 271 | 1.237374 | 3.35328354 | Pseudomonas | 286 | Bacteria | Bacteria | 501 | 2.05e-137 | NTclustered | gi|1108598209|gb|CP017073.1| | 303 | g9725 | i0 | 100 | 100 | 271 | 0 | 100 | 0 | 1 | 271 | 630064 | 630334 | Pseudomonas putida strain PP112420 chromosome, complete genome | blastn | 27100 | 501 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas putida | ||
| 11767247 | 11767247 | PRJNA1145574_P_NODE_10550_length_259_cov_1.677419_g10366_i0 | PRJNA1145574 | 10550 | 259 | 1.677419 | 4.34451521 | Methylocystis echinoides | 29468 | Bacteria | Bacteria | 187 | 6.199999999999998e-43 | NTclustered | gi|2759751595|gb|CP156085.1| | 29468 | g10366 | i0 | 81.579 | 12.5714285714286 | 228 | 40 | 88 | 2 | 1 | 227 | 100950 | 101176 | Methylocystis echinoides strain RIM plasmid pME_1, complete sequence | blastn | 3256 | 187 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Methylocystaceae | Methylocystis | Methylocystis echinoides | ||
| 11767274 | 11767274 | PRJNA1145574_P_NODE_12310_length_249_cov_1.210227_g12126_i0 | PRJNA1145574 | 12310 | 249 | 1.210227 | 3.01346523 | Pseudomonas protegens | 380021 | Bacteria | Bacteria | 379 | 9.1e-101 | NTclustered | gi|2025292517|gb|CP054869.1| | 380021 | g12126 | i0 | 94.779 | 98.0240963855422 | 249 | 4 | 100 | 2 | 1 | 249 | 3104633 | 3104872 | Pseudomonas protegens strain PPRAR09 chromosome | blastn | 24408 | 379 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas protegens | ||
| 11767390 | 11767390 | PRJNA1145574_P_NODE_9810_length_273_cov_1.090000_g9626_i0 | PRJNA1145574 | 9810 | 273 | 1.09 | 2.9757 | Agrobacterium cucumeris | 2862866 | Bacteria | Bacteria | 435 | 2.13e-117 | NTclustered | gi|2507774551|gb|CP080388.1| | 2862866 | g9626 | i0 | 96.935 | 172.336996336996 | 261 | 5 | 100 | 3 | 15 | 273 | 313794 | 314053 | Agrobacterium cucumeris strain O132 chromosome 2, complete sequence | blastn | 47048 | 435 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Rhizobiaceae | Agrobacterium | Agrobacterium cucumeris | ||
| 12511922 | 12511922 | PRJNA1145574_P_NODE_10330_length_263_cov_1.636842_g10146_i0 | PRJNA1145574 | 10330 | 263 | 1.636842 | 4.30489446 | Pseudomonadota | 1224 | Bacteria | Bacteria | 470 | 5.59e-128 | NTclustered | gi|2788821993|gb|CP166817.1| | 287 | g10146 | i0 | 100 | 115.897338403042 | 254 | 0 | 97 | 0 | 1 | 254 | 2453162 | 2453415 | Pseudomonas aeruginosa strain M7242404 chromosome, complete genome | blastn | 30481 | 470 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas aeruginosa | ||
| 12511933 | 12511933 | PRJNA1145574_P_NODE_12050_length_250_cov_0.881356_g11866_i0 | PRJNA1145574 | 12050 | 250 | 0.881356 | 2.20339 | Stenotrophomonas | 40323 | Bacteria | Bacteria | 462 | 8.83e-126 | NTclustered | gi|2235474145|gb|CP080573.1| | 40324 | g11866 | i0 | 100 | 100.952 | 250 | 0 | 100 | 0 | 1 | 250 | 3488661 | 3488910 | Stenotrophomonas maltophilia strain FZD2 chromosome, complete genome | blastn | 25238 | 462 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Lysobacterales | Lysobacteraceae | Stenotrophomonas | Stenotrophomonas maltophilia | ||
| 12511935 | 12511935 | PRJNA1145574_P_NODE_12510_length_249_cov_0.886364_g12326_i0 | PRJNA1145574 | 12510 | 249 | 0.886364 | 2.20704636 | Escherichia | 561 | Bacteria | Bacteria | 455 | 1.47e-123 | NTclustered | gi|2249812848|gb|CP098223.1| | 562 | g12326 | i0 | 99.598 | 100 | 249 | 1 | 100 | 0 | 1 | 249 | 1604679 | 1604431 | Escherichia coli strain Z0117EC0005 chromosome, complete genome | blastn | 24900 | 455 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 13042305 | 13042305 | PRJNA1145574_P_NODE_11751_length_251_cov_0.876404_g11567_i0 | PRJNA1145574 | 11751 | 251 | 0.876404 | 2.19977404 | Candidatus Fonsibacter ubiquis | 1925548 | Bacteria | Bacteria | 442 | 1.1599999999999995e-119 | NTclustered | gi|1269271235|gb|CP024034.1| | 1925548 | g11567 | i0 | 98.406 | 1 | 251 | 4 | 100 | 0 | 1 | 251 | 789347 | 789597 | Candidatus Fonsibacter ubiquis isolate LSUCC0530 chromosome, complete genome | blastn | 251 | 442 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Candidatus Pelagibacterales | Candidatus Fonsibacter | Candidatus Fonsibacter ubiquis | |||
| 13042329 | 13042329 | PRJNA1145574_P_NODE_13251_length_247_cov_0.896552_g13067_i0 | PRJNA1145574 | 13251 | 247 | 0.896552 | 2.21448344 | Acinetobacter sp. SCLZS86 | 2908637 | Bacteria | Bacteria | 412 | 8.89e-111 | NTclustered | gi|2179308879|gb|CP090864.1| | 2908637 | g13067 | i0 | 96.761 | 13 | 247 | 8 | 100 | 0 | 1 | 247 | 3039839 | 3039593 | Acinetobacter sp. SCLZS86 chromosome, complete genome | blastn | 3211 | 412 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Acinetobacter | Acinetobacter sp. SCLZS86 | ||
| 13042346 | 13042346 | PRJNA1145574_P_NODE_14391_length_243_cov_0.917647_g14207_i0 | PRJNA1145574 | 14391 | 243 | 0.917647 | 2.22988221 | Moraxella sp. DOX410 | 3076087 | Bacteria | Bacteria | 433 | 6.69e-117 | NTclustered | gi|2586132762|gb|CP135138.1| | 3076087 | g14207 | i0 | 98.765 | 16 | 243 | 3 | 100 | 0 | 1 | 243 | 1484911 | 1484669 | Moraxella sp. DOX410 chromosome, complete genome | blastn | 3888 | 433 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Moraxella | Moraxella sp. DOX410 | ||
| 13786633 | 13786633 | PRJNA1145574_P_NODE_13451_length_246_cov_0.901734_g13267_i0 | PRJNA1145574 | 13451 | 246 | 0.901734 | 2.21826564 | Salmonella | 590 | Bacteria | Bacteria | 455 | 1.4500000000000002e-123 | NTclustered | gi|2475988518|gb|CP121075.1| | 595 | g13267 | i0 | 100 | 100 | 246 | 0 | 100 | 0 | 1 | 246 | 1832605 | 1832850 | Salmonella enterica subsp. enterica serovar Infantis strain R22.2574 chromosome, complete genome | blastn | 24600 | 455 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Salmonella | Salmonella enterica | ||
| 14317528 | 14317528 | PRJNA1145574_P_NODE_10452_length_261_cov_1.324468_g10268_i0 | PRJNA1145574 | 10452 | 261 | 1.324468 | 3.45686148 | Vogesella sp. XCS3 | 2877939 | Bacteria | Bacteria | 477 | 3.3099999999999986e-130 | NTclustered | gi|2124242701|gb|CP085530.1| | 2877939 | g10268 | i0 | 99.617 | 475.846743295019 | 261 | 1 | 100 | 0 | 1 | 261 | 78269 | 78009 | Vogesella sp. XCS3 chromosome, complete genome | blastn | 124196 | 477 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Neisseriales | Chromobacteriaceae | Vogesella | Vogesella sp. XCS3 | ||
| 14317563 | 14317563 | PRJNA1145574_P_NODE_13092_length_247_cov_0.896552_g12908_i0 | PRJNA1145574 | 13092 | 247 | 0.896552 | 2.21448344 | Sphingomonas sp. MMS24-J45 | 3238806 | Bacteria | Bacteria | 224 | 4.469999999999999e-54 | NTclustered | gi|2851418772|gb|CP173255.1| | 3238806 | g12908 | i0 | 83.133 | 2.02024291497976 | 249 | 38 | 100 | 4 | 1 | 247 | 287835 | 288081 | Sphingomonas sp. MMS24-J45 chromosome, complete genome | blastn | 499 | 224 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Sphingomonadales | Sphingomonadaceae | Sphingomonas | Sphingomonas sp. MMS24-J45 | ||
| 14317564 | 14317564 | PRJNA1145574_P_NODE_13172_length_247_cov_0.896552_g12988_i0 | PRJNA1145574 | 13172 | 247 | 0.896552 | 2.21448344 | Achromobacter xylosoxidans | 85698 | Bacteria | Bacteria | 388 | 1.5e-103 | NTclustered | gi|2883231034|dbj|AP038910.1| | 85698 | g12988 | i0 | 95.547 | 176.63967611336 | 247 | 3 | 100 | 6 | 1 | 247 | 5303582 | 5303344 | Achromobacter xylosoxidans MyNCGM749 DNA, complete genome | blastn | 43630 | 388 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Alcaligenaceae | Achromobacter | Achromobacter xylosoxidans | ||
| 14317577 | 14317577 | PRJNA1145574_P_NODE_14232_length_244_cov_0.912281_g14048_i0 | PRJNA1145574 | 14232 | 244 | 0.912281 | 2.22596564 | Roseateles amylovorans | 2978473 | Bacteria | Bacteria | 209 | 1.23e-49 | NTclustered | gi|2327629256|gb|CP104562.2| | 2978473 | g14048 | i0 | 82.4 | 101.143442622951 | 250 | 35 | 100 | 8 | 1 | 244 | 3129188 | 3129434 | Roseateles amylovorans strain BIM B-1768 chromosome, complete genome | blastn | 24679 | 209 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Sphaerotilaceae | Roseateles | Roseateles amylovorans | ||
| 15061023 | 15061023 | PRJNA1145574_P_NODE_15012_length_234_cov_2.055901_g14828_i0 | PRJNA1145574 | 15012 | 234 | 2.055901 | 4.81080834 | Pannonibacter | 227873 | Bacteria | Bacteria | 263 | 8.89e-66 | NTclustered | gi|971238602|gb|CP013068.1| | 121719 | g14828 | i0 | 87.66 | 22.0854700854701 | 235 | 18 | 99 | 4 | 2 | 233 | 4744491 | 4744717 | Pannonibacter phragmitetus strain 31801, complete genome | blastn | 5168 | 263 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Stappiaceae | Pannonibacter | Pannonibacter phragmitetus | ||
| 15061054 | 15061054 | PRJNA1145574_P_NODE_7812_length_309_cov_1.453390_g7628_i0 | PRJNA1145574 | 7812 | 309 | 1.45339 | 4.4909751 | root | 1 | Root_unresolved | Root_unresolved | 549 | 8.389999999999996e-152 | NTclustered | gi|674993598|dbj|AP014630.1| | 106649 | g7628 | i0 | 98.706 | 672.796116504854 | 309 | 4 | 100 | 0 | 1 | 309 | 24521 | 24213 | Acinetobacter guillouiae DNA, complete geonome, strain: NBRC 110550 | blastn | 207894 | 549 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Acinetobacter | Acinetobacter guillouiae | ||
| 15591502 | 15591502 | PRJNA1145574_P_NODE_10493_length_260_cov_1.668449_g10309_i0 | PRJNA1145574 | 10493 | 260 | 1.668449 | 4.3379674 | Paracidovorax avenae | 80867 | Bacteria | Bacteria | 453 | 5.5600000000000005e-123 | NTclustered | gi|1373229855|gb|CP028287.1| | 80867 | g10309 | i0 | 98.077 | 99.8346153846154 | 260 | 5 | 100 | 0 | 1 | 260 | 5176292 | 5176033 | Paracidovorax avenae strain AA78_5 chromosome | blastn | 25957 | 453 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Paracidovorax | Paracidovorax avenae | ||
| 16335693 | 16335693 | PRJNA1145574_P_NODE_1213_length_748_cov_6.786667_g1046_i0 | PRJNA1145574 | 1213 | 748 | 6.786667 | 50.76426916 | Pseudomonadaceae | 135621 | Bacteria | Bacteria | 1376 | 0 | NTclustered | gi|1364849610|gb|CP027657.1| | 300 | g1046 | i0 | 99.866 | 392.140374331551 | 748 | 1 | 100 | 0 | 1 | 748 | 1090790 | 1090043 | Ectopseudomonas mendocina strain NEB698 chromosome, complete genome | blastn | 293321 | 1376 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Ectopseudomonas | Ectopseudomonas mendocina | ||
| 16335718 | 16335718 | PRJNA1145574_P_NODE_2633_length_503_cov_2.416279_g2451_i0 | PRJNA1145574 | 2633 | 503 | 2.416279 | 12.15388337 | Delftia | 80865 | Bacteria | Bacteria | 924 | 0 | NTclustered | gi|1134452940|gb|CP019171.1| | 80866 | g2451 | i0 | 99.801 | 363.988071570577 | 503 | 1 | 100 | 0 | 1 | 503 | 766823 | 766321 | Delftia acidovorans isolate ANG1, complete genome | blastn | 183086 | 924 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Delftia | Delftia acidovorans | ||
| 16335751 | 16335751 | PRJNA1145574_P_NODE_7993_length_305_cov_1.978448_g7809_i0 | PRJNA1145574 | 7993 | 305 | 1.978448 | 6.0342664 | Comamonas | 283 | Bacteria | Bacteria | 564 | 2.95e-156 | NTclustered | gi|2548169491|gb|CP129672.1| | 285 | g7809 | i0 | 100 | 527.606557377049 | 305 | 0 | 100 | 0 | 1 | 305 | 1250681 | 1250377 | Comamonas testosteroni strain MWF001 chromosome, complete genome | blastn | 160920 | 564 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Comamonas | Comamonas testosteroni | ||
| 17610991 | 17610991 | PRJNA1145574_P_NODE_9894_length_271_cov_1.575758_g9710_i0 | PRJNA1145574 | 9894 | 271 | 1.575758 | 4.27030418 | Pseudomonadaceae | 135621 | Bacteria | Bacteria | 361 | 3.639999999999999e-95 | NTclustered | gi|2536885667|gb|CP129400.1| | 489632 | g9710 | i0 | 91.923 | 82.239852398524 | 260 | 17 | 95 | 3 | 14 | 271 | 83318 | 83061 | Ectopseudomonas chengduensis strain WD211 chromosome, complete genome | blastn | 22287 | 361 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Ectopseudomonas | Ectopseudomonas chengduensis | ||
| 18140443 | 18140443 | PRJNA1145574_P_NODE_9455_length_279_cov_1.218447_g9271_i0 | PRJNA1145574 | 9455 | 279 | 1.218447 | 3.39946713 | Roseateles sp. DAIF2 | 2714952 | Bacteria | Bacteria | 355 | 1.75e-93 | NTclustered | gi|1934957904|gb|CP049919.1| | 2714952 | g9271 | i0 | 89.68 | 65.5949820788531 | 281 | 25 | 100 | 4 | 1 | 279 | 4155374 | 4155096 | Roseateles sp. DAIF2 chromosome, complete genome | blastn | 18301 | 355 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Sphaerotilaceae | Roseateles | Roseateles sp. DAIF2 | ||
| 18884852 | 18884852 | PRJNA1145574_P_NODE_14295_length_244_cov_0.883041_g14111_i0 | PRJNA1145574 | 14295 | 244 | 0.883041 | 2.15462004 | Salmonella | 590 | Bacteria | Bacteria | 451 | 1.86e-122 | NTclustered | gi|1674979691|dbj|AP019692.1| | 28150 | g14111 | i0 | 100 | 100 | 244 | 0 | 100 | 0 | 1 | 244 | 4269455 | 4269212 | Salmonella enterica subsp. enterica serovar Senftenberg SL180013 DNA, complete genome | blastn | 24400 | 451 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Salmonella | Salmonella enterica | ||
| 18884870 | 18884870 | PRJNA1145574_P_NODE_3835_length_421_cov_4.928161_g3651_i0 | PRJNA1145574 | 3835 | 421 | 4.928161 | 20.74755781 | Comamonadaceae | 80864 | Bacteria | Bacteria | 745 | 0 | NTclustered | gi|470481450|ref|NR_076475.1| | 216465 | g3651 | i0 | 98.804 | 312.401425178147 | 418 | 5 | 99 | 0 | 2 | 419 | 1682 | 1265 | Polaromonas naphthalenivorans strain CJ2 23S ribosomal RNA gene, complete sequence | blastn | 131521 | 752 | 0.990691489361702 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Polaromonas | Polaromonas naphthalenivorans | ||
| 19414754 | 19414754 | PRJNA1145574_P_NODE_5476_length_363_cov_1.075862_g5292_i0 | PRJNA1145574 | 5476 | 363 | 1.075862 | 3.90537906 | Vogesella sp. XCS3 | 2877939 | Bacteria | Bacteria | 671 | 0 | NTclustered | gi|2124242701|gb|CP085530.1| | 2877939 | g5292 | i0 | 100 | 480.363636363636 | 363 | 0 | 100 | 0 | 1 | 363 | 79537 | 79175 | Vogesella sp. XCS3 chromosome, complete genome | blastn | 174372 | 671 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Neisseriales | Chromobacteriaceae | Vogesella | Vogesella sp. XCS3 | ||
| 20690150 | 20690150 | PRJNA1145574_P_NODE_14797_length_242_cov_0.923077_g14613_i0 | PRJNA1145574 | 14797 | 242 | 0.923077 | 2.23384634 | Acinetobacter johnsonii | 40214 | Bacteria | Bacteria | 448 | 2.3799999999999995e-121 | NTclustered | gi|1995439409|gb|CP070866.1| | 40214 | g14613 | i0 | 100 | 28 | 242 | 0 | 100 | 0 | 1 | 242 | 1392311 | 1392070 | Acinetobacter johnsonii strain XY27 chromosome, complete genome | blastn | 6776 | 448 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Acinetobacter | Acinetobacter johnsonii | ||
| 20690152 | 20690152 | PRJNA1145574_P_NODE_14877_length_242_cov_0.923077_g14693_i0 | PRJNA1145574 | 14877 | 242 | 0.923077 | 2.23384634 | Bradyrhizobium prioriisuperbiae | 2854389 | Bacteria | Bacteria | 302 | 1.96e-77 | NTclustered | gi|2589062547|gb|CP135921.1| | 2854389 | g14693 | i0 | 89.256 | 99.8471074380165 | 242 | 24 | 99 | 2 | 2 | 242 | 212414 | 212654 | Bradyrhizobium prioriisuperbiae strain BL16A chromosome, complete genome | blastn | 24163 | 302 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Nitrobacteraceae | Bradyrhizobium | Bradyrhizobium prioriisuperbiae | ||
| 21435193 | 21435193 | PRJNA1145574_P_NODE_1577_length_660_cov_7.522998_g1398_i0 | PRJNA1145574 | 1577 | 660 | 7.522998 | 49.651786800000004 | Pseudomonas | 286 | Bacteria | Bacteria | 1136 | 0 | NTclustered | gi|1403512007|emb|LS483433.1| | 46679 | g1398 | i0 | 97.734 | 486.809090909091 | 662 | 12 | 100 | 3 | 1 | 660 | 123406 | 122746 | Pseudomonas mucidolens strain NCTC8068 genome assembly, chromosome: 1 | blastn | 321294 | 1147 | 0.990409764603313 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas mucidolens | ||
| 21435208 | 21435208 | PRJNA1145574_P_NODE_4757_length_384_cov_2.807074_g4573_i0 | PRJNA1145574 | 4757 | 384 | 2.807074 | 10.77916416 | root | 1 | Root_unresolved | Root_unresolved | 704 | 0 | NTclustered | gi|674993598|dbj|AP014630.1| | 106649 | g4573 | i0 | 99.74 | 622.481770833333 | 384 | 1 | 100 | 0 | 1 | 384 | 22845 | 23228 | Acinetobacter guillouiae DNA, complete geonome, strain: NBRC 110550 | blastn | 239033 | 704 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Acinetobacter | Acinetobacter guillouiae | ||
| 21965412 | 21965412 | PRJNA1145574_P_NODE_10598_length_258_cov_2.194595_g10414_i0 | PRJNA1145574 | 10598 | 258 | 2.194595 | 5.6620551 | Methylobacterium aquaticum | 270351 | Bacteria | Bacteria | 442 | 1.1899999999999995e-119 | NTclustered | gi|760865928|dbj|AP014704.1| | 270351 | g10414 | i0 | 97.674 | 1.96124031007752 | 258 | 5 | 100 | 1 | 1 | 258 | 1665844 | 1665588 | Methylobacterium aquaticum DNA, complete genome, strain: MA-22A | blastn | 506 | 442 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Methylobacteriaceae | Methylobacterium | Methylobacterium aquaticum | ||
| 21965542 | 21965542 | PRJNA1145574_P_NODE_9078_length_285_cov_2.179245_g8894_i0 | PRJNA1145574 | 9078 | 285 | 2.179245 | 6.21084825 | Methylophilus methylotrophus | 17 | Bacteria | Bacteria | 294 | 3.96e-75 | NTclustered | gi|1525772245|gb|CP033953.1| | 17 | g8894 | i0 | 85.417 | 4.85614035087719 | 288 | 36 | 100 | 3 | 1 | 285 | 115486 | 115770 | Methylophilus methylotrophus strain D22 chromosome | blastn | 1384 | 294 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Nitrosomonadales | Methylophilaceae | Methylophilus | Methylophilus methylotrophus | ||
| 24514489 | 24514489 | PRJNA1145574_P_NODE_10000_length_269_cov_1.908163_g9816_i0 | PRJNA1145574 | 10000 | 269 | 1.908163 | 5.13295847 | Rheinheimera sp. F8 | 1763998 | Bacteria | Bacteria | 497 | 2.63e-136 | NTclustered | gi|975021511|gb|CP013656.1| | 1763998 | g9816 | i0 | 100 | 662.074349442379 | 269 | 0 | 100 | 0 | 1 | 269 | 418466 | 418734 | Rheinheimera sp. F8 genome | blastn | 178098 | 497 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Chromatiales | Chromatiaceae | Rheinheimera | Rheinheimera sp. F8 | ||
| 25259612 | 25259612 | PRJNA1145574_P_NODE_3900_length_418_cov_9.605797_g3716_i0 | PRJNA1145574 | 3900 | 418 | 9.605797 | 40.15223146 | Acinetobacter | 469 | Bacteria | Bacteria | 773 | 0 | NTclustered | gi|1995439409|gb|CP070866.1| | 40214 | g3716 | i0 | 100 | 681.645933014354 | 418 | 0 | 100 | 0 | 1 | 418 | 497464 | 497047 | Acinetobacter johnsonii strain XY27 chromosome, complete genome | blastn | 284928 | 773 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Acinetobacter | Acinetobacter johnsonii | ||
| 25259623 | 25259623 | PRJNA1145574_P_NODE_7480_length_316_cov_1.522634_g7296_i0 | PRJNA1145574 | 7480 | 316 | 1.522634 | 4.81152344 | Alcaligenaceae | 506 | Bacteria | Bacteria | 579 | 1.0999999999999999e-160 | NTclustered | gi|29242999|emb|AJ509008.1| | 511 | g7296 | i0 | 99.684 | 320.003164556962 | 316 | 1 | 100 | 0 | 1 | 316 | 1121 | 806 | Alcaligenes faecalis partial 23S rRNA gene, isolate 6713-A1 | blastn | 101121 | 579 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Alcaligenaceae | Alcaligenes | Alcaligenes faecalis |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;