RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA1145574" and tax_kingdom = "Orthornavirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Orthornavirae · 2 ✖

bioproject 1

  • PRJNA1145574 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10492338 10492338 PRJNA1145574_P_NODE_5149_length_372_cov_1.842809_g4965_i0 PRJNA1145574 5149 372 1.842809 6.85524948 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 573 6.109999999999998e-159   NTclustered gi|2551699335|gb|OK619588.1| 3063761 g4965 i0 95.304 0.973118279569892 362 15 97 2 11 371 5329 5689 Zebrafish picornavirus 2 isolate AU/2020 polyprotein gene, complete cds blastn 362 573 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Danio blood picornavirus/Zebrafish picornavirus 2
24514572 24514572 PRJNA1145574_P_NODE_5240_length_369_cov_1.979730_g5056_i0 PRJNA1145574 5240 369 1.97973 7.3052037 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 392 1.82e-104   NTclustered gi|2551699335|gb|OK619588.1| 3063761 g5056 i0 96.61 0.867208672086721 236 8 87 0 1 236 4430 4195 Zebrafish picornavirus 2 isolate AU/2020 polyprotein gene, complete cds blastn 320 392 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Danio blood picornavirus/Zebrafish picornavirus 2

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;