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contig_metadata

12 rows where analysis = "blastn", bioproject = "PRJNA1145574" and tax_clade = "Sar"

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tax_superkingdom 1

tax_phylum 1

tax_clade 1

  • Sar · 12 ✖

bioproject 1

  • PRJNA1145574 · 12 ✖

analysis 1

  • blastn · 12 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1563339 1563339 PRJNA1145574_P_NODE_4142_length_408_cov_1.391045_g3958_i0 PRJNA1145574 4142 408 1.391045 5.6754636 Tetrahymena pyriformis 5908 SAR_Eukaryotes SAR_Eukaryotes 283 1.28e-71   NTclustered gi|10935|emb|X56693.1| 5908 g3958 i0 85.985 41.468137254902 264 37 65 0 1 264 460 723 Tetrahymena pyriformis TUF11 gene for ubiquitin-ribosomal protein fusion protein blastn 16919 283 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena pyriformis
2839525 2839525 PRJNA1145574_P_NODE_6323_length_341_cov_1.078358_g6139_i0 PRJNA1145574 6323 341 1.078358 3.67720078 Vorticella microstoma 77619 SAR_Eukaryotes SAR_Eukaryotes 575 1.5499999999999994e-159   NTclustered gi|21429685|gb|AY101350.1| 77619 g6139 i0 97.067 93.0293255131965 341 10 100 0 1 341 601 261 Vorticella microstoma alpha-tubulin gene, partial cds blastn 31723 575 1 Eukaryota Sar   Ciliophora Oligohymenophorea Sessilida Vorticellidae Vorticella Vorticella microstoma
7941657 7941657 PRJNA1145574_P_NODE_10767_length_255_cov_2.170330_g10583_i0 PRJNA1145574 10767 255 2.17033 5.5343415 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 460 3.25e-125   NTclustered gi|110645063|gb|DQ665311.1| 151077 g10583 i0 99.216 29.0862745098039 255 2 100 0 1 255 997 743 Chilodonella uncinata clone 1 elongation factor 1-alpha (EF-1alpha) gene, partial cds; macronuclear blastn 7417 460 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
12511974 12511974 PRJNA1145574_P_NODE_5750_length_355_cov_1.382979_g5566_i0 PRJNA1145574 5750 355 1.382979 4.90957545 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 612 1.2299999999999996e-170   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g5566 i0 97.746 15.969014084507 355 8 100 0 1 355 1854 1500 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 5669 612 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
14317575 14317575 PRJNA1145574_P_NODE_14032_length_244_cov_0.994152_g13848_i0 PRJNA1145574 14032 244 0.994152 2.42573088 Tetrahymena thermophila 5911 SAR_Eukaryotes SAR_Eukaryotes 220 5.699999999999998e-53   NTclustered gi|829164538|ref|XM_972017.2| 312017 g13848 i0 88.889 1.42622950819672 180 18 73 2 28 206 48 226 Tetrahymena thermophila SB210 40S ribosomal protein S29 mRNA blastn 348 220 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
14317595 14317595 PRJNA1145574_P_NODE_3672_length_429_cov_1.671348_g3488_i0 PRJNA1145574 3672 429 1.671348 7.17008292 Chilodonella hexasticha 1938391 SAR_Eukaryotes SAR_Eukaryotes 710 0   NTclustered gi|1389430805|gb|MH341633.1| 1938391 g3488 i0 96.503 75.1981351981352 429 15 100 0 1 429 2313 1885 Chilodonella hexasticha strain C.hexasticha AS large subunit ribosomal RNA gene, partial sequence blastn 32260 710 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella hexasticha
19414731 19414731 PRJNA1145574_P_NODE_2196_length_556_cov_1.515528_g2014_i0 PRJNA1145574 2196 556 1.515528 8.42633568 Tetrahymena pyriformis 5908 SAR_Eukaryotes SAR_Eukaryotes 673 0   NTclustered gi|217407|dbj|D11083.1|TETEF1A 5908 g2014 i0 88.649 82.0557553956834 555 59 99 4 1 553 240 792 Tetrahymena pyriformis mRNA for elongation factor 1 alpha blastn 45623 673 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena pyriformis
20690157 20690157 PRJNA1145574_P_NODE_2277_length_543_cov_1.402128_g2095_i0 PRJNA1145574 2277 543 1.402128 7.61355504 Opisthonecta henneguyi 6026 SAR_Eukaryotes SAR_Eukaryotes 815 0   NTclustered gi|4063597|gb|AF056109.1| 6026 g2095 i0 93.75 63.2357274401473 544 32 100 2 1 543 1026 484 Telotrochidium henneguyii translation elongation factor 1-alpha (TEF1) gene, partial cds blastn 34337 815 1 Eukaryota Sar   Ciliophora Oligohymenophorea Sessilida Opisthonectidae Opisthonecta Opisthonecta henneguyi
20690212 20690212 PRJNA1145574_P_NODE_7857_length_308_cov_2.655319_g7673_i0 PRJNA1145574 7857 308 2.655319 8.17838252 Tetrahymena thermophila 5911 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.008   NTclustered gi|829186935|ref|XM_001022570.3| 312017 g7673 i0 100 0.0941558441558442 29 0 9 0 193 221 1636 1608 Tetrahymena thermophila SB210 Serine/Threonine kinase domain protein partial mRNA blastn 29 54.7 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
21965489 21965489 PRJNA1145574_P_NODE_3218_length_454_cov_1.876640_g3034_i0 PRJNA1145574 3218 454 1.87664 8.5199456 Gastrostyla steinii 99926 SAR_Eukaryotes SAR_Eukaryotes 514 4.67e-141   NTclustered gi|21215203|gb|AF510204.1| 99926 g3034 i0 87.168 52.9162995594714 452 58 99 0 1 452 624 1075 Gastrostyla steinii beta-tubulin gene, complete cds blastn 24024 514 1 Eukaryota Sar   Ciliophora Spirotrichea Sporadotrichida Oxytrichidae Gastrostyla Gastrostyla steinii
22710210 22710210 PRJNA1145574_P_NODE_6718_length_332_cov_1.204633_g6534_i0 PRJNA1145574 6718 332 1.204633 3.99938156 Ciliophora 5878 SAR_Eukaryotes SAR_Eukaryotes 425 1.5999999999999999e-114   NTclustered gi|10792|emb|X12768.1| 5908 g6534 i0 89.759 91.8012048192771 332 34 100 0 1 332 1431 1100 Tetrahymena pyriformis beta-tubulin gene 1 (beta-TT1) blastn 30478 425 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena pyriformis
23241093 23241093 PRJNA1145574_P_NODE_7219_length_321_cov_1.883065_g7035_i0 PRJNA1145574 7219 321 1.883065 6.04463865 Tetrahymena rostrata 5909 SAR_Eukaryotes SAR_Eukaryotes 542 1.47e-149   NTclustered gi|1837628855|gb|MN158348.1| 5909 g7035 i0 97.196 88.9688473520249 321 8 100 1 1 321 4533 4214 Tetrahymena rostrata strain TRAUS 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 28559 542 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena rostrata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;