RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA1145276" and tax_phylum = "Ascomycota"

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tax_superkingdom 1

tax_phylum 1

  • Ascomycota · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1145276 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5391564 5391564 PRJNA1145276_P_NODE_16825_length_248_cov_0.880000_g16768_i0 PRJNA1145276 16825 248 0.88 2.1824 Aspergillus citrinoterreus 1577496 Fungi Fungi 78.7 3.7e-10   NTclustered gi|2735172527|gb|CP155514.1| 1577496 g16768 i0 84.337 0.653225806451613 83 9 33 4 12 92 607991 607911 Aspergillus citrinoterreus strain CBS138921 chromosome VI blastn 162 78.7 1 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Eurotiales Aspergillaceae Aspergillus Aspergillus citrinoterreus
6136102 6136102 PRJNA1145276_P_NODE_8445_length_350_cov_1.068592_g8388_i0 PRJNA1145276 8445 350 1.068592 3.740072 Opisthokonta 33154 Fungi Fungi 641 1.5399999999999996e-179   NTclustered gi|325484983|gb|HQ407432.1| 5061 g8388 i0 99.714 98.2942857142857 350 1 100 0 1 350 737 388 Aspergillus niger strain B1.Eg mitochondrial citrate synthase precursor, gene, partial cds; nuclear gene for mitochondrial product blastn 34403 641 1 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Eurotiales Aspergillaceae Aspergillus Aspergillus niger
14317260 14317260 PRJNA1145276_P_NODE_15912_length_251_cov_0.865169_g15855_i0 PRJNA1145276 15912 251 0.865169 2.17157419 Lithohypha guttulata 1690604 Fungi Fungi 52.8 0.023   NTclustered gi|2725247396|ref|XM_064899539.1| 1690604 g15855 i0 100 0.111553784860558 28 0 11 0 19 46 800 827 Lithohypha guttulata uncharacterized protein (LTR64_005199), partial mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Chaetothyriales Trichomeriaceae Lithohypha Lithohypha guttulata
16865554 16865554 PRJNA1145276_P_NODE_19434_length_241_cov_0.916667_g19377_i0 PRJNA1145276 19434 241 0.916667 2.20916747 Yarrowia lipolytica 4952 Fungi Fungi 446 8.519999999999999e-121   NTclustered gi|2801361827|ref|XM_506055.3| 4952 g19377 i0 100 1 241 0 100 0 1 241 156 396 Yarrowia lipolytica uncharacterized protein (YALI1_F38191g), partial mRNA blastn 241 446 1 Eukaryota Opisthokonta Fungi Ascomycota Dipodascomycetes Dipodascales   Yarrowia Yarrowia lipolytica

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;