RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA1144090" and tax_phylum = "Zoopagomycota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Zoopagomycota · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1144090 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6665632 6665632 PRJNA1144090_P_NODE_81586_length_279_cov_1.436893_g81051_i0 PRJNA1144090 81586 279 1.436893 4.00893147 Linderina pennispora 61395 Fungi Fungi 161 4.0899999999999995e-35   NTclustered gi|2028323432|ref|XM_040888084.1| 61395 g81051 i0 88.489 50.0681003584229 139 8 48 5 17 151 695 561 Linderina pennispora 40S ribosomal protein S5 (DL89DRAFT_268926), mRNA blastn 13969 161 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Linderina Linderina pennispora
9215661 9215661 PRJNA1144090_P_NODE_68788_length_305_cov_1.965517_g68253_i0 PRJNA1144090 68788 305 1.965517 5.99482685 Kickxella alabastrina 61397 Fungi Fungi 63.9 1.31e-5   NTclustered gi|2323998884|ref|XM_051538994.1| 61397 g68253 i0 93.023 4.24590163934426 43 3 14 0 3 45 696 738 Kickxella alabastrina nitrogen permease regulator of amino acid transport activity 3-domain-containing protein (BX661DRAFT_2390), mRNA blastn 1295 63.9 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Kickxella Kickxella alabastrina
12511655 12511655 PRJNA1144090_P_NODE_19410_length_618_cov_3.462385_g18886_i0 PRJNA1144090 19410 618 3.462385 21.3975393 Fungi 4751 Fungi Fungi 217 2.05e-51   NTclustered gi|2324021736|ref|XM_051538475.1| 61397 g18886 i0 80.919 36.4757281553398 283 46 45 7 247 525 351 73 Kickxella alabastrina histone-fold-containing protein (BX661DRAFT_201168), partial mRNA blastn 22542 217 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Kickxella Kickxella alabastrina
14316326 14316326 PRJNA1144090_P_NODE_49432_length_363_cov_2.044828_g48897_i0 PRJNA1144090 49432 363 2.044828 7.42272564 Linderina pennispora 61395 Fungi Fungi 230 1.4799999999999995e-55   NTclustered gi|2028324866|ref|XM_040885706.1| 61395 g48897 i0 79.037 3.97245179063361 353 60 95 8 18 363 347 2 Linderina pennispora 60S ribosomal protein L10-A (DL89DRAFT_259616), partial mRNA blastn 1442 230 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Linderina Linderina pennispora

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;