contig_metadata
5 rows where analysis = "blastn", bioproject = "PRJNA1144090" and tax_phylum = "Spirochaetota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1561842 | 1561842 | PRJNA1144090_P_NODE_34202_length_445_cov_4.540323_g33667_i0 | PRJNA1144090 | 34202 | 445 | 4.540323 | 20.20443735 | Thiospirochaeta perfilievii | 252967 | Bacteria | Bacteria | 219 | 4.01e-52 | NTclustered | gi|1735508175|gb|CP035807.1| | 252967 | g33667 | i0 | 78.723 | 62.038202247191 | 329 | 68 | 74 | 2 | 118 | 445 | 580066 | 579739 | Thiospirochaeta perfilievii strain P chromosome, complete genome | blastn | 27607 | 219 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Spirochaetaceae | Thiospirochaeta | Thiospirochaeta perfilievii | ||
| 5390654 | 5390654 | PRJNA1144090_P_NODE_56225_length_339_cov_1.466165_g55690_i0 | PRJNA1144090 | 56225 | 339 | 1.466165 | 4.97029935 | Entomospira entomophila | 2719988 | Bacteria | Bacteria | 65.8 | 4.11e-6 | NTclustered | gi|2446642546|gb|CP118174.1| | 2719988 | g55690 | i0 | 95.122 | 0.12094395280236 | 41 | 2 | 12 | 0 | 35 | 75 | 107783 | 107743 | Entomospira entomophila strain BR193 chromosome | blastn | 41 | 65.8 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Spirochaetaceae | Entomospira | Entomospira entomophila | ||
| 12511763 | 12511763 | PRJNA1144090_P_NODE_96510_length_255_cov_1.203297_g95975_i0 | PRJNA1144090 | 96510 | 255 | 1.203297 | 3.06840735 | Borreliella | 64895 | Bacteria | Bacteria | 52.8 | 0.023 | NTclustered | gi|2561334454|gb|CP116883.1| | 62088 | g95975 | i0 | 100 | 0.43921568627451 | 28 | 0 | 11 | 0 | 167 | 194 | 13953 | 13980 | Borreliella valaisiana strain 89B13 plasmid p_lp36, complete sequence | blastn | 112 | 52.8 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Borreliaceae | Borreliella | Borreliella valaisiana | ||
| 15590312 | 15590312 | PRJNA1144090_P_NODE_53633_length_347_cov_4.675182_g53098_i0 | PRJNA1144090 | 53633 | 347 | 4.675182 | 16.22288154 | Spirochaetia bacterium | 2053615 | Bacteria | Bacteria | 52.8 | 0.033 | NTclustered | gi|2621700913|emb|OY759747.1| | 2053615 | g53098 | i0 | 100 | 0.0806916426512968 | 28 | 0 | 8 | 0 | 79 | 106 | 2846437 | 2846410 | MAG: Spirochaetia bacterium isolate 029c9a96-c795-42b2-9c0d-59f5314b817a genome assembly, chromosome: 1 | blastn | 28 | 52.8 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetia bacterium | |||||
| 20689405 | 20689405 | PRJNA1144090_P_NODE_98717_length_251_cov_2.280899_g98182_i0 | PRJNA1144090 | 98717 | 251 | 2.280899 | 5.72505649 | Brachyspira intermedia | 84377 | Bacteria | Bacteria | 52.8 | 0.023 | NTclustered | gi|343385146|gb|CP002874.1| | 1045858 | g98182 | i0 | 100 | 0.111553784860558 | 28 | 0 | 11 | 0 | 218 | 245 | 1324487 | 1324514 | Brachyspira intermedia PWS/A, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Brachyspirales | Brachyspiraceae | Brachyspira | Brachyspira intermedia |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;