RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA1144090" and tax_phylum = "Perkinsozoa"

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tax_superkingdom 1

tax_phylum 1

  • Perkinsozoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1144090 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5390856 5390856 PRJNA1144090_P_NODE_75345_length_291_cov_1.412844_g74810_i0 PRJNA1144090 75345 291 1.412844 4.11137604 Perkinsus marinus 31276 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.027   NTclustered gi|294925773|ref|XM_002778955.1| 423536 g74810 i0 96.875 0.109965635738832 32 0 11 1 21 51 475 444 Perkinsus marinus ATCC 50983 heat shock 40 kDa protein, putative, mRNA blastn 32 52.8 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus marinus
21963664 21963664 PRJNA1144090_P_NODE_11038_length_847_cov_168.697674_g10601_i0 PRJNA1144090 11038 847 168.697674 1428.86929878 Perkinsus marinus 31276 SAR_Eukaryotes SAR_Eukaryotes 106 6.45e-18   NTclustered gi|294874782|ref|XM_002767050.1| 423536 g10601 i0 93.056 0.12987012987013 72 5 9 0 613 684 79 8 Perkinsus marinus ATCC 50983 60S ribosomal protein L29, putative, mRNA blastn 110 106 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus marinus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;