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contig_metadata

17 rows where analysis = "blastn", bioproject = "PRJNA1144090" and tax_phylum = "Discosea"

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tax_superkingdom 1

tax_phylum 1

  • Discosea · 17 ✖

tax_clade 1

bioproject 1

  • PRJNA1144090 · 17 ✖

analysis 1

  • blastn · 17 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1561475 1561475 PRJNA1144090_P_NODE_103862_length_248_cov_1.451429_g103327_i0 PRJNA1144090 103862 248 1.451429 3.59954392 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 156 1.66e-33   NTclustered gi|470467005|ref|XM_004341715.1| 1257118 g103327 i0 78.884 5.03629032258065 251 37 98 16 1 243 535 777 Acanthamoeba castellanii str. Neff TolAlike protein (ACA1_199540), partial mRNA blastn 1249 156 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
2838157 2838157 PRJNA1144090_P_NODE_47443_length_371_cov_1.798658_g46908_i0 PRJNA1144090 47443 371 1.798658 6.67302118 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 167 1.21e-36   NTclustered gi|470467005|ref|XM_004341715.1| 1257118 g46908 i0 81.567 5.0377358490566 217 26 57 13 81 290 744 535 Acanthamoeba castellanii str. Neff TolAlike protein (ACA1_199540), partial mRNA blastn 1869 167 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
4114099 4114099 PRJNA1144090_P_NODE_21804_length_578_cov_8.253465_g21279_i0 PRJNA1144090 21804 578 8.253465 47.7050277 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 359 3e-94   NTclustered gi|470455615|ref|XM_004340928.1| 1257118 g21279 i0 82.641 64.2681660899654 409 67 70 4 43 449 10 416 Acanthamoeba castellanii str. Neff ribosomal protein S23 (S12), putative (ACA1_232480), partial mRNA blastn 37147 359 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
4114129 4114129 PRJNA1144090_P_NODE_25244_length_531_cov_6.751092_g24713_i0 PRJNA1144090 25244 531 6.751092 35.84829852 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 261 7.96e-65   NTclustered gi|470514016|ref|XM_004352683.1| 1257118 g24713 i0 86.809 2.72128060263654 235 29 44 2 210 443 105 338 Acanthamoeba castellanii str. Neff ribosomal protein S19, putative (ACA1_067910), partial mRNA blastn 1445 261 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
4114564 4114564 PRJNA1144090_P_NODE_65764_length_312_cov_2.372385_g65229_i0 PRJNA1144090 65764 312 2.372385 7.4018412 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 209 1.64e-49   NTclustered gi|470512227|ref|XM_004352398.1| 1257118 g65229 i0 79.048 94.7820512820513 315 59 99 5 3 312 652 340 Acanthamoeba castellanii str. Neff succinyl coenzyme A synthetase alpha subunit (ACA1_359750), partial mRNA blastn 29572 209 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
5390275 5390275 PRJNA1144090_P_NODE_21165_length_588_cov_5.784466_g20640_i0 PRJNA1144090 21165 588 5.784466 34.01266008 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 409 2.9899999999999997e-109   NTclustered gi|470519083|ref|XM_004353374.1| 1257118 g20640 i0 80.443 58.8061224489796 542 100 92 4 48 586 25 563 Acanthamoeba castellanii str. Neff actinrelated protein 2, putative (ACA1_074650), partial mRNA blastn 34578 409 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
5390556 5390556 PRJNA1144090_P_NODE_47345_length_371_cov_2.889262_g46810_i0 PRJNA1144090 47345 371 2.889262 10.71916202 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 219 3.29e-52   NTclustered gi|380254595|gb|JQ253379.1| 5755 g46810 i0 79.934 0.897574123989218 304 55 81 5 68 368 320 620 Acanthamoeba castellanii protein kinase C4 (PKC4) mRNA, partial cds; plastid blastn 333 219 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
6665504 6665504 PRJNA1144090_P_NODE_69626_length_303_cov_1.986957_g69091_i0 PRJNA1144090 69626 303 1.986957 6.02047971 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 193 1.59e-44   NTclustered gi|470440169|ref|XM_004339222.1| 1257118 g69091 i0 79.487 1.33003300330033 273 54 90 2 5 276 985 1256 Acanthamoeba castellanii str. Neff Tcomplex protein 1, eta subunit (ACA1_059740), partial mRNA blastn 403 193 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
9214870 9214870 PRJNA1144090_P_NODE_105848_length_247_cov_0.885057_g105313_i0 PRJNA1144090 105848 247 0.885057 2.18609079 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 54.7 0.006   NTclustered gi|470481900|ref|XM_004367396.1| 1257118 g105313 i0 100 0.117408906882591 29 0 12 0 112 140 3636 3608 Acanthamoeba castellanii str. Neff CAPGly domain containing protein (ACA1_195000), partial mRNA blastn 29 54.7 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
14316272 14316272 PRJNA1144090_P_NODE_44712_length_383_cov_3.625806_g44177_i0 PRJNA1144090 44712 383 3.625806 13.88683698 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 237 9.4e-58   NTclustered gi|470418757|ref|XM_004337073.1| 1257118 g44177 i0 79.42 25.5065274151436 345 63 89 8 1 341 13 353 Acanthamoeba castellanii str. Neff RAP1A, member of RAS oncogene family (ACA1_215900), partial mRNA blastn 9769 237 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
15590653 15590653 PRJNA1144090_P_NODE_84833_length_273_cov_2.135000_g84298_i0 PRJNA1144090 84833 273 2.135 5.82855 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 150 8.639999999999998e-32   NTclustered gi|470466994|ref|XM_004341714.1| 1257118 g84298 i0 86.861 3.84249084249084 137 15 50 1 29 165 748 615 Acanthamoeba castellanii str. Neff TolAlike protein (ACA1_199530), partial mRNA blastn 1049 150 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
16864545 16864545 PRJNA1144090_P_NODE_51474_length_355_cov_2.975177_g50939_i0 PRJNA1144090 51474 355 2.975177 10.56187835 Paramoeba branchiphila 308475 Discosea other_Eukaryota 370 8.16e-98   NTclustered gi|226347442|gb|FJ807261.1| 308475 g50939 i0 85.352 96.6957746478873 355 52 100 0 1 355 707 353 Neoparamoeba branchiphila strain AMOP1 elongation factor 1 alpha gene, partial cds blastn 34327 370 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Paramoebidae Paramoeba Paramoeba branchiphila
18139232 18139232 PRJNA1144090_P_NODE_58355_length_332_cov_2.903475_g57820_i0 PRJNA1144090 58355 332 2.903475 9.639537 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 60.2 1.87e-4   NTclustered gi|470446304|ref|XM_004339895.1| 1257118 g57820 i0 87.037 0.162650602409639 54 5 16 2 102 154 386 438 Acanthamoeba castellanii str. Neff TBC domain containing protein (ACA1_207940), partial mRNA blastn 54 60.2 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
18139473 18139473 PRJNA1144090_P_NODE_81135_length_279_cov_6.883495_g80600_i0 PRJNA1144090 81135 279 6.883495 19.20495105 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 167 8.789999999999999e-37   NTclustered gi|470526398|ref|XM_004356698.1| 1257118 g80600 i0 81.043 0.756272401433692 211 38 75 2 11 220 270 61 Acanthamoeba castellanii str. Neff cytochrome c, putative (ACA1_175250), partial mRNA blastn 211 167 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
21963734 21963734 PRJNA1144090_P_NODE_118898_length_233_cov_2.218750_g118363_i0 PRJNA1144090 118898 233 2.21875 5.1696875 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 185 1.9699999999999998e-42   NTclustered gi|470414546|ref|XM_004336652.1| 1257118 g118363 i0 82.192 8.84549356223176 219 35 93 4 17 233 648 432 Acanthamoeba castellanii str. Neff protein kinase (ACA1_125810), partial mRNA blastn 2061 185 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
24512750 24512750 PRJNA1144090_P_NODE_105880_length_247_cov_0.885057_g105345_i0 PRJNA1144090 105880 247 0.885057 2.18609079 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 119 2.17e-22   NTclustered gi|470528557|ref|XM_004367868.1| 1257118 g105345 i0 84.874 1.51417004048583 119 16 48 2 11 128 235 352 Acanthamoeba castellanii str. Neff ribosomal protein S8e, putative (ACA1_288920), partial mRNA blastn 374 119 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
24513198 24513198 PRJNA1144090_P_NODE_42100_length_397_cov_1.410494_g41565_i0 PRJNA1144090 42100 397 1.410494 5.59966118 Paramoeba branchiphila 308475 Discosea other_Eukaryota 385 3.299999999999999e-102   NTclustered gi|226347442|gb|FJ807261.1| 308475 g41565 i0 90.169 75.808564231738 295 29 98 0 97 391 717 1011 Neoparamoeba branchiphila strain AMOP1 elongation factor 1 alpha gene, partial cds blastn 30096 385 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Paramoebidae Paramoeba Paramoeba branchiphila

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;