RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA1144090" and tax_phylum = "Cercozoa"

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tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA1144090 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9214964 9214964 PRJNA1144090_P_NODE_116828_length_240_cov_50.838323_g116293_i0 PRJNA1144090 116828 240 50.838323 122.0119752 Paulinella micropora 1928728 SAR_Eukaryotes SAR_Eukaryotes 252 1.98e-62   NTclustered gi|1389527545|dbj|LC383945.1| 1928728 g116293 i0 89.109 79.7166666666667 202 22 84 0 1 202 432 231 Paulinella micropora gene for actin, complete cds blastn 19132 252 1 Eukaryota Sar   Cercozoa Imbricatea Euglyphida Paulinellidae Paulinella Paulinella micropora
10491155 10491155 PRJNA1144090_P_NODE_6369_length_1134_cov_5.471254_g6041_i0 PRJNA1144090 6369 1134 5.471254 62.04402036 Proleptomonas faecicola 149084 SAR_Eukaryotes SAR_Eukaryotes 760 0   NTclustered gi|300676734|gb|GQ377664.1| 149084 g6041 i0 81.423 78.4391534391534 942 163 82 11 15 949 952 16 Proleptomonas faecicola alpha-tubulin (Atub) gene, partial cds blastn 88950 760 1 Eukaryota Sar   Cercozoa   Glissomonadida   Proleptomonas Proleptomonas faecicola
14316561 14316561 PRJNA1144090_P_NODE_70352_length_301_cov_3.026316_g69817_i0 PRJNA1144090 70352 301 3.026316 9.10921116 Cercomonas agilis 310805 SAR_Eukaryotes SAR_Eukaryotes 276 1.53e-69   NTclustered gi|58414956|gb|AY748813.1| 310805 g69817 i0 84.452 138.445182724253 283 41 99 2 1 280 2 284 Cercomonas agilis polyubiquitin (UBQ) gene, partial cds blastn 41672 276 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Cercomonas Cercomonas agilis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;