RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA1144090" and tax_phylum = "Blastocladiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Blastocladiomycota · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1144090 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4861163 4861163 PRJNA1144090_P_NODE_8964_length_948_cov_2.914286_g8569_i0 PRJNA1144090 8964 948 2.914286 27.62743128 Opisthokonta 33154 Fungi Fungi 604 5.869999999999998e-168   NTclustered gi|111054102|gb|DQ787196.1| 4808 g8569 i0 80.024 80.9556962025316 846 145 88 20 2 835 2326 3159 Blastocladiella emersonii heat shock protein 90 kDa (hsp90) gene, complete cds blastn 76746 610 0.99016393442623 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Blastocladiella Blastocladiella emersonii
6664913 6664913 PRJNA1144090_P_NODE_12406_length_797_cov_2.997238_g11948_i0 PRJNA1144090 12406 797 2.997238 23.88798686 Blastocladiella emersonii 4808 Fungi Fungi 544 1.08e-149   NTclustered gi|111054102|gb|DQ787196.1| 4808 g11948 i0 79.648 97.7126725219573 796 131 97 25 25 797 1584 2371 Blastocladiella emersonii heat shock protein 90 kDa (hsp90) gene, complete cds blastn 77877 544 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Blastocladiella Blastocladiella emersonii
20688293 20688293 PRJNA1144090_P_NODE_102217_length_249_cov_1.596591_g101682_i0 PRJNA1144090 102217 249 1.596591 3.97551159 Blastocladiella emersonii 4808 Fungi Fungi 213 9.77e-51   NTclustered gi|111054102|gb|DQ787196.1| 4808 g101682 i0 82.979 55.0763052208835 235 40 94 0 8 242 2391 2625 Blastocladiella emersonii heat shock protein 90 kDa (hsp90) gene, complete cds blastn 13714 213 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Blastocladiella Blastocladiella emersonii
23985297 23985297 PRJNA1144090_P_NODE_52319_length_352_cov_2.505376_g51784_i0 PRJNA1144090 52319 352 2.505376 8.81892352 Blastocladiella 4807 Fungi Fungi 84.2 1.18e-11   NTclustered gi|321173769|gb|HQ888750.1| 64508 g51784 i0 90.476 15.8153409090909 63 6 18 0 22 84 649 587 Blastocladiella britannica strain Barr 214 28S ribosomal RNA gene, partial sequence blastn 5567 84.2 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Blastocladiella Blastocladiella britannica

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;