RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA1144090" and tax_phylum = "Armatimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Armatimonadota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1144090 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4113947 4113947 PRJNA1144090_P_NODE_115464_length_241_cov_1.833333_g114929_i0 PRJNA1144090 115464 241 1.833333 4.41833253 uncultured Armatimonadetes bacterium 157466 Bacteria Bacteria 268 1.98e-67   NTclustered gi|2874254000|emb|OY970325.1| 157466 g114929 i0 87.137 662.195020746888 241 25 99 5 1 238 1306186 1305949 MAG: uncultured Armatimonadetes bacterium isolate MFD05942.bin.1.84 genome assembly, chromosome: 1 blastn 159589 268 1 Bacteria   Bacillati Armatimonadota         uncultured Armatimonadetes bacterium
19413899 19413899 PRJNA1144090_P_NODE_95436_length_256_cov_2.054645_g94901_i0 PRJNA1144090 95436 256 2.054645 5.2598912 uncultured Armatimonadetes bacterium 157466 Bacteria Bacteria 191 4.73e-44   NTclustered gi|2874254000|emb|OY970325.1| 157466 g94901 i0 90.909 452.1484375 143 11 55 2 114 255 1305367 1305226 MAG: uncultured Armatimonadetes bacterium isolate MFD05942.bin.1.84 genome assembly, chromosome: 1 blastn 115750 191 1 Bacteria   Bacillati Armatimonadota         uncultured Armatimonadetes bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;