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contig_metadata

19 rows where analysis = "blastn", bioproject = "PRJNA1144090" and tax_clade = "core chlorophytes"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • core chlorophytes · 19 ✖

bioproject 1

  • PRJNA1144090 · 19 ✖

analysis 1

  • blastn · 19 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
287553 287553 PRJNA1144090_P_NODE_65681_length_312_cov_3.280335_g65146_i0 PRJNA1144090 65681 312 3.280335 10.2346452 Monoraphidium neglectum 145388 Plants Plants 128 4.7099999999999995e-25   NTclustered gi|926789524|ref|XM_014047782.1| 145388 g65146 i0 79.474 6.19551282051282 190 31 60 5 120 305 186 1 Monoraphidium neglectum 60S ribosomal protein L38 mRNA blastn 1933 128 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Monoraphidium Monoraphidium neglectum
4114846 4114846 PRJNA1144090_P_NODE_90684_length_263_cov_2.589474_g90149_i0 PRJNA1144090 90684 263 2.589474 6.81031662 Monoraphidium neglectum 145388 Plants Plants 67.6 8.57e-7   NTclustered gi|926778993|ref|XM_014042517.1| 145388 g90149 i0 81.609 0.703422053231939 87 11 33 5 108 193 133 215 Monoraphidium neglectum DNA-binding protein HEXBP mRNA blastn 185 67.6 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Monoraphidium Monoraphidium neglectum
6135898 6135898 PRJNA1144090_P_NODE_7865_length_1014_cov_4.729012_g7498_i0 PRJNA1144090 7865 1014 4.729012 47.95218168 Eukaryota 2759 Plants Plants 540 1.8e-148   NTclustered gi|2082247947|ref|XM_001698013.2| 3055 g7498 i0 82.923 57.1439842209073 609 95 59 7 194 796 804 199 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_06g278222v5), mRNA blastn 57944 545 0.990825688073395 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
8686118 8686118 PRJNA1144090_P_NODE_37267_length_424_cov_3.948718_g36732_i0 PRJNA1144090 37267 424 3.948718 16.74256432 Eukaryota 2759 Plants Plants 211 6.37e-50   NTclustered gi|760437614|ref|XM_011397574.1| 3075 g36732 i0 79.048 53.188679245283 315 60 74 6 11 322 324 13 Auxenochlorella protothecoides GTP-binding protein YPTC1 partial mRNA blastn 22552 211 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Auxenochlorella Auxenochlorella protothecoides
9215146 9215146 PRJNA1144090_P_NODE_23608_length_552_cov_4.943633_g23078_i0 PRJNA1144090 23608 552 4.943633 27.28885416 Pediastrum angulosum 271408 Plants Plants 305 3.78e-78   NTclustered gi|1388162275|gb|MF276978.1| 271408 g23078 i0 81.186 72.0688405797101 388 65 70 6 115 498 133435 133818 Pediastrum angulosum chloroplast, complete genome blastn 39782 305 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Hydrodictyaceae Pediastrum Pediastrum angulosum
9215742 9215742 PRJNA1144090_P_NODE_77988_length_285_cov_2.759434_g77453_i0 PRJNA1144090 77988 285 2.759434 7.8643869 Chlamydomonas reinhardtii 3055 Plants Plants 316 8.459999999999998e-82   NTclustered gi|2082236188|ref|XM_043058392.1| 3055 g77453 i0 86.926 95.2771929824561 283 35 99 2 1 282 854 573 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_01g016050v5), mRNA blastn 27154 316 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
10490485 10490485 PRJNA1144090_P_NODE_108169_length_246_cov_0.890173_g107634_i0 PRJNA1144090 108169 246 0.890173 2.18982558 Chlorella variabilis 554065 Plants Plants 137 5.96e-28   NTclustered gi|552844156|ref|XM_005850963.1| 554065 g107634 i0 78.298 1.7479674796748 235 35 92 14 17 243 522 296 Chlorella variabilis hypothetical protein (CHLNCDRAFT_56983) mRNA, complete cds blastn 430 137 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella variabilis
10490621 10490621 PRJNA1144090_P_NODE_13769_length_754_cov_1.809104_g13299_i0 PRJNA1144090 13769 754 1.809104 13.64064416 Pseudochlorodesmis sp. HV01306a 2358488 Plants Plants 60.2 4.52e-4   NTclustered gi|1482675645|gb|MH591095.1| 2358488 g13299 i0 88.462 0.297082228116711 52 3 6 2 129 177 29302 29353 Pseudochlorodesmis sp. HV01306a chloroplast, partial genome blastn 224 60.2 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Bryopsidales Bryopsidaceae Pseudochlorodesmis Pseudochlorodesmis sp. HV01306a
11765493 11765493 PRJNA1144090_P_NODE_103030_length_249_cov_0.875000_g102495_i0 PRJNA1144090 103030 249 0.875 2.17875 Monoraphidium neglectum 145388 Plants Plants 111 3.67e-20   NTclustered gi|926787223|ref|XM_014046632.1| 145388 g102495 i0 82.812 11.0923694779116 128 18 51 3 22 147 517 392 Monoraphidium neglectum Myosin-Vb mRNA blastn 2762 111 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Monoraphidium Monoraphidium neglectum
11766155 11766155 PRJNA1144090_P_NODE_58830_length_331_cov_1.763566_g58295_i0 PRJNA1144090 58830 331 1.763566 5.83740346 Chlamydomonas reinhardtii 3055 Plants Plants 195 4.89e-45   NTclustered gi|2082263148|ref|XM_001693658.2| 3055 g58295 i0 77.679 3.91842900302115 336 63 99 11 1 330 652 323 Chlamydomonas reinhardtii ribosomal protein S3a (CHLRE_13g568650v5), mRNA blastn 1297 195 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
12511631 12511631 PRJNA1144090_P_NODE_101770_length_249_cov_2.886364_g101235_i0 PRJNA1144090 101770 249 2.886364 7.18704636 Halimeda 118221 Plants Plants 52.8 0.023   NTclustered gi|2281558632|ref|NC_065377.1| 118223 g101235 i0 100 0.224899598393574 28 0 11 0 192 219 99947 99974 Halimeda opuntia chloroplast, complete genome blastn 56 52.8 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Bryopsidales Halimedaceae Halimeda Halimeda opuntia
12511743 12511743 PRJNA1144090_P_NODE_84070_length_274_cov_3.368159_g83535_i0 PRJNA1144090 84070 274 3.368159 9.22875566 Eukaryota 2759 Plants Plants 246 1.08e-60   NTclustered gi|371782091|emb|HE610123.1| 3107 g83535 i0 91.351 67.4890510948905 185 9 67 6 10 192 4947 5126 Hydrodictyon reticulatum 18S rRNA gene (partial), 5.8S rRNA gene, 28S rRNA gene (partial), ITS1 and ITS2, strain M2243 blastn 18492 246 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Hydrodictyaceae Hydrodictyon Hydrodictyon reticulatum
16335456 16335456 PRJNA1144090_P_NODE_49833_length_361_cov_6.451389_g49298_i0 PRJNA1144090 49833 361 6.451389 23.28951429 Eukaryota 2759 Plants Plants 287 8.620000000000001e-73   NTclustered gi|38195094|gb|AF052206.2| 3055 g49298 i0 82.979 75.1274238227147 329 44 89 9 39 361 38 360 Chlamydomonas reinhardtii cyclophilin 1 (cyp1) mRNA, complete cds blastn 27121 287 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
16864629 16864629 PRJNA1144090_P_NODE_58274_length_333_cov_1.142308_g57739_i0 PRJNA1144090 58274 333 1.142308 3.80388564 Chlorella variabilis 554065 Plants Plants 261 4.790000000000001e-65   NTclustered gi|552832044|ref|XM_005848193.1| 554065 g57739 i0 82.609 80.042042042042 299 48 89 4 37 333 431 135 Chlorella variabilis hypothetical protein (CHLNCDRAFT_35097) mRNA, complete cds blastn 26654 261 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella variabilis
18884543 18884543 PRJNA1144090_P_NODE_110515_length_244_cov_1.403509_g109980_i0 PRJNA1144090 110515 244 1.403509 3.42456196 Chlamydomonadales 3042 Plants Plants 52.8 0.022   NTclustered gi|2082241187|ref|XM_043060403.1| 3055 g109980 i0 100 0.35655737704918 28 0 11 0 7 34 2655 2628 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_03g144987v5), mRNA blastn 87 52.8 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
19413453 19413453 PRJNA1144090_P_NODE_54856_length_343_cov_2.462963_g54321_i0 PRJNA1144090 54856 343 2.462963 8.44796309 Monoraphidium neglectum 145388 Plants Plants 204 8.459999999999998e-48   NTclustered gi|926793650|ref|XM_014049845.1| 145388 g54321 i0 78.261 5.84839650145773 322 66 93 4 1 320 291 610 Monoraphidium neglectum 60S ribosomal protein L7-3 mRNA blastn 2006 204 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Monoraphidium Monoraphidium neglectum
22709874 22709874 PRJNA1144090_P_NODE_22618_length_566_cov_12.693712_g22091_i0 PRJNA1144090 22618 566 12.693712 71.84640992 Eukaryota 2759 Plants Plants 316 1.79e-81   NTclustered gi|2082259086|ref|XM_001697336.2| 3055 g22091 i0 81.654 62.2173144876325 387 65 68 6 123 506 127 510 Chlamydomonas reinhardtii ribosomal protein S14 (CHLRE_11g480150v5), mRNA blastn 35215 318 0.993710691823899 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
22709931 22709931 PRJNA1144090_P_NODE_60278_length_327_cov_1.740157_g59743_i0 PRJNA1144090 60278 327 1.740157 5.69031339 Bryopsis 3128 Plants Plants 217 1.03e-51   NTclustered gi|969822368|gb|KT950951.1| 325651 g59743 i0 78.899 92.3700305810398 327 63 99 6 4 327 868 545 Bryopsis corticulans actin gene, partial cds blastn 30205 217 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Bryopsidales Bryopsidaceae Bryopsis Bryopsis corticulans
24512800 24512800 PRJNA1144090_P_NODE_111280_length_244_cov_0.900585_g110745_i0 PRJNA1144090 111280 244 0.900585 2.1974274 Chlamydomonas reinhardtii 3055 Plants Plants 202 2.07e-47   NTclustered gi|2082253475|ref|XM_001695212.2| 3055 g110745 i0 83.945 22.155737704918 218 28 89 3 27 242 907 1119 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_09g386750v5), mRNA blastn 5406 202 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;