RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA1144090" and tax_clade = "Cyanobacteriota/Melainabacteria group"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Cyanobacteriota/Melainabacteria group · 2 ✖

bioproject 1

  • PRJNA1144090 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
20688981 20688981 PRJNA1144090_P_NODE_61637_length_323_cov_1.840000_g61102_i0 PRJNA1144090 61637 323 1.84 5.9432 Moorena producens 1155739 Bacteria Bacteria 54.7 0.008   NTclustered gi|1082408432|gb|CP017599.1| 1458985 g61102 i0 96.875 0.0990712074303406 32 1 10 0 276 307 3015851 3015882 Moorena producens PAL-8-15-08-1 chromosome, complete genome blastn 32 54.7 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Coleofasciculales Coleofasciculaceae Moorena Moorena producens
23985240 23985240 PRJNA1144090_P_NODE_110679_length_244_cov_0.900585_g110144_i0 PRJNA1144090 110679 244 0.900585 2.1974274 Chroococcidiopsis 54298 Bacteria Bacteria 363 8.949999999999999e-96   NTclustered gi|428006994|gb|CP003597.1| 251229 g110144 i0 94.828 2.20081967213115 232 12 95 0 13 244 5914637 5914406 Chroococcidiopsis thermalis PCC 7203, complete genome blastn 537 363 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Chroococcidiopsidales Chroococcidiopsidaceae Chroococcidiopsis Chroococcidiopsis thermalis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;